88 homologs were found in PanDaTox collection
for query gene Avi_5264 on replicon NC_011988
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011988  Avi_5264  PH Adaption potassium efflux system  100 
 
 		 93 aa  178  2e-44  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3132  putative monovalent cation/H+ antiporter subunit F  62.37 
 
 		 93 aa  115  3e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  57.14 
 
 		 92 aa  113  1.0000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
NC_009636  Smed_2810  putative monovalent cation/H+ antiporter subunit F  63.53 
 
 		 93 aa  112  2.0000000000000002e-24  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.482202 
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  58.7 
 
 		 94 aa  110  9e-24  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2658  putative monovalent cation/H+ antiporter subunit F  53.85 
 
 		 92 aa  108  2.0000000000000002e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  58.7 
 
 		 94 aa  108  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0110721 
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  57.61 
 
 		 94 aa  108  3e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal  1 
 
 
-
 
NC_009429  Rsph17025_3621  putative monovalent cation/H+ antiporter subunit F  54.84 
 
 		 93 aa  100  5e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0308607  normal  1 
 
 
-
 
NC_004311  BRA0504  putative monovalent cation/H+ antiporter subunit F  62.37 
 
 		 93 aa  100  6e-21  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009504  BOV_A0439  putative monovalent cation/H+ antiporter subunit F  62.37 
 
 		 93 aa  100  6e-21  Brucella ovis ATCC 25840  Bacteria  normal  0.324734  n/a   
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  52.69 
 
 		 93 aa  100  7e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_008686  Pden_1285  putative monovalent cation/H+ antiporter subunit F  56.99 
 
 		 93 aa  99.4  1e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.399019  normal  1 
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  51.61 
 
 		 93 aa  98.6  2e-20  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3535  putative monovalent cation/H+ antiporter subunit F  62.37 
 
 		 93 aa  99  2e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.480103  n/a   
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  51.61 
 
 		 93 aa  98.2  3e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  51.06 
 
 		 94 aa  97.8  5e-20  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_008782  Ajs_2478  multiple resistance and pH regulation protein F  48.39 
 
 		 93 aa  94.7  4e-19  Acidovorax sp. JS42  Bacteria  normal  0.648417  normal  0.0636047 
 
 
-
 
NC_011992  Dtpsy_1382  multiple resistance and pH regulation protein F  48.39 
 
 		 93 aa  94.7  4e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.393681  n/a   
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  45.88 
 
 		 89 aa  89.4  2e-17  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  58.21 
 
 		 89 aa  88.6  2e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  49.44 
 
 		 92 aa  89.4  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal  1 
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  49.44 
 
 		 92 aa  88.2  3e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  50.75 
 
 		 89 aa  83.6  8e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  53.73 
 
 		 89 aa  83.6  8e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  47.31 
 
 		 92 aa  83.6  8e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  47.31 
 
 		 92 aa  83.6  9e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal  1 
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  50.6 
 
 		 92 aa  81.6  0.000000000000003  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
NC_008752  Aave_3293  multiple resistance and pH regulation protein F  44.57 
 
 		 96 aa  81.6  0.000000000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.3108  normal  1 
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  50.6 
 
 		 92 aa  81.3  0.000000000000004  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_1601  multiple resistance and pH regulation protein F  50.75 
 
 		 92 aa  81.3  0.000000000000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  42.35 
 
 		 93 aa  80.9  0.000000000000005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  52.24 
 
 		 89 aa  80.9  0.000000000000006  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  50.6 
 
 		 92 aa  80.1  0.000000000000008  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  50.6 
 
 		 92 aa  80.1  0.000000000000008  Pseudomonas putida F1  Bacteria  normal  1  hitchhiker  0.00558279 
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  44.71 
 
 		 89 aa  80.1  0.000000000000009  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_4733  multiple resistance and pH regulation protein F  47.44 
 
 		 92 aa  80.1  0.00000000000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.74985 
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  43.82 
 
 		 89 aa  78.6  0.00000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  48.31 
 
 		 92 aa  77.8  0.00000000000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0617372 
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  50.75 
 
 		 89 aa  77.4  0.00000000000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.332403 
 
 
-
 
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  43.02 
 
 		 89 aa  76.6  0.00000000000009  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal  1 
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  44 
 
 		 89 aa  76.6  0.0000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal  1 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  53.73 
 
 		 89 aa  76.3  0.0000000000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  49.25 
 
 		 89 aa  75.1  0.0000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  48.53 
 
 		 89 aa  75.1  0.0000000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  46.25 
 
 		 102 aa  73.9  0.0000000000007  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_008463  PA14_50690  putative monovalent cation/H+ antiporter subunit F  49.21 
 
 		 85 aa  72.4  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00854292 
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  46.27 
 
 		 89 aa  71.6  0.000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  49.21 
 
 		 89 aa  71.6  0.000000000004  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.0184419 
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  48.53 
 
 		 90 aa  68.6  0.00000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  44.78 
 
 		 89 aa  68.6  0.00000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal  1 
 
 
-
 
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  44.59 
 
 		 94 aa  67.8  0.00000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  47.76 
 
 		 89 aa  67  0.00000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  48.53 
 
 		 89 aa  66.6  0.0000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  48.53 
 
 		 89 aa  66.6  0.0000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  47.76 
 
 		 89 aa  64.7  0.0000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal  1 
 
 
-
 
NC_007925  RPC_3853  putative monovalent cation/H+ antiporter subunit F  44.78 
 
 		 89 aa  62  0.000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  40 
 
 		 94 aa  62.4  0.000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  35.96 
 
 		 99 aa  60.8  0.000000006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  42.86 
 
 		 89 aa  58.2  0.00000004  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  33.33 
 
 		 118 aa  54.3  0.0000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal  1 
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  35.96 
 
 		 98 aa  52.4  0.000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_0672  putative monovalent cation/H+ antiporter subunit F  46.03 
 
 		 89 aa  52  0.000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  32.95 
 
 		 97 aa  51.6  0.000004  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.675094 
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  37.88 
 
 		 85 aa  50.1  0.00001  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  27.17 
 
 		 96 aa  49.7  0.00002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_008347  Mmar10_0885  multiple resistance and pH regulation protein F  34.12 
 
 		 105 aa  48.5  0.00003  Maricaulis maris MCS10  Bacteria  normal  0.15072  normal  0.188818 
 
 
-
 
NC_009456  VC0395_1125  putative monovalent cation/H+ antiporter subunit F  27.5 
 
 		 103 aa  47.4  0.00006  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000095206  n/a   
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  27.5 
 
 		 90 aa  45.4  0.0002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  28.17 
 
 		 91 aa  45.8  0.0002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  35.96 
 
 		 88 aa  45.4  0.0003  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  30.88 
 
 		 111 aa  45.1  0.0003  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_010003  Pmob_0896  multiple resistance and pH regulation protein F  36.67 
 
 		 65 aa  45.4  0.0003  Petrotoga mobilis SJ95  Bacteria  normal  0.297824  n/a   
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  34.57 
 
 		 93 aa  45.1  0.0004  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  27.5 
 
 		 87 aa  44.3  0.0006  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  32.31 
 
 		 91 aa  44.3  0.0007  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_011369  Rleg2_0879  putative monovalent cation/H+ antiporter subunit F  37.88 
 
 		 116 aa  43.5  0.0009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00982664  normal  1 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  29.41 
 
 		 86 aa  43.1  0.001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.0688335 
 
 
-
 
NC_009636  Smed_0612  putative monovalent cation/H+ antiporter subunit F  37.68 
 
 		 128 aa  43.5  0.001  Sinorhizobium medicae WSM419  Bacteria  normal  0.716984  normal  1 
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  25.35 
 
 		 90 aa  43.5  0.001  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_011831  Cagg_2927  multiple resistance and pH regulation protein F  29.58 
 
 		 87 aa  42.4  0.002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00000965772  normal  0.611551 
 
 
-
 
NC_013747  Htur_5158  multiple resistance and pH regulation protein F  29.85 
 
 		 93 aa  42.4  0.002  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.716079  n/a   
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  36.36 
 
 		 117 aa  42  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal  1 
 
 
-
 
NC_013131  Caci_4839  multiple resistance and pH regulation protein F  27.71 
 
 		 86 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.10923  normal  1 
 
 
-
 
NC_013922  Nmag_3452  multiple resistance and pH regulation protein F  29.85 
 
 		 93 aa  40.8  0.006  Natrialba magadii ATCC 43099  Archaea  normal  0.167745  n/a   
 
 
-
 
NC_010483  TRQ2_1612  putative monovalent cation/H+ antiporter subunit F  36.51 
 
 		 82 aa  40.8  0.007  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000561435  n/a   
 
 
-
 
NC_013889  TK90_0753  multiple resistance and pH regulation protein F  23.46 
 
 		 91 aa  40.8  0.007  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0206212  normal  1 
 
 
-
 
NC_002976  SERP0533  putative monovalent cation/H+ antiporter subunit F  27.16 
 
 		 97 aa  40.4  0.009  Staphylococcus epidermidis RP62A  Bacteria  normal  0.567164  n/a   
 
 
-
 
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