Gene RPD_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0672 
Symbol 
ID4021143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp756655 
End bp756924 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content61% 
IMG OID637960860 
Productputative monovalent cation/H+ antiporter subunit F 
Protein accessionYP_567811 
Protein GI91975152 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA CAGCGTGCCT CATCGCCGTC GCCGCGATCA GCGTCTCGAT GCTGATGAAC 
CTCTACCGGC TCGGCCGCGG CCCCGACGTG CTCGACCGGA TTCTCGCGCT GGAGACGCTG
GTGGTCAACG CCGTCGGCCT CGTGGTGGTG ATGGGACTCT GGTTCAACAC CAGCCTGTAT
TTCGAGATCG CGCTGCTGAT CGTGACCGTC GGATTTCTGT CGACCGTCGC GTTCTGCAAA
TATCTGCTGC GCGGCAATGT GATCGAATAG
 
Protein sequence
MIATACLIAV AAISVSMLMN LYRLGRGPDV LDRILALETL VVNAVGLVVV MGLWFNTSLY 
FEIALLIVTV GFLSTVAFCK YLLRGNVIE