96 homologs were found in PanDaTox collection
for query gene Pmen_1445 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  100 
 
 		 89 aa  171  3.9999999999999995e-42  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal  1 
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  66.29 
 
 		 89 aa  119  9.999999999999999e-27  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  57.3 
 
 		 89 aa  106  1e-22  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  55.06 
 
 		 89 aa  104  4e-22  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  55.06 
 
 		 89 aa  103  9e-22  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  71.64 
 
 		 89 aa  100  5e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  60.67 
 
 		 90 aa  100  5e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  61.54 
 
 		 89 aa  99.4  1e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_008463  PA14_50690  putative monovalent cation/H+ antiporter subunit F  73.85 
 
 		 85 aa  99.4  2e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00854292 
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  55.81 
 
 		 89 aa  99.4  2e-20  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  49.44 
 
 		 89 aa  96.7  9e-20  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.0184419 
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  52.81 
 
 		 89 aa  96.3  1e-19  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  52.81 
 
 		 89 aa  91.7  3e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  49.44 
 
 		 92 aa  90.1  9e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  48.31 
 
 		 89 aa  89.7  1e-17  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  44.94 
 
 		 89 aa  89.4  2e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  46.07 
 
 		 89 aa  88.6  3e-17  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal  1 
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  47.19 
 
 		 92 aa  88.2  3e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  55.56 
 
 		 89 aa  87.4  5e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal  1 
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  57.33 
 
 		 102 aa  87.8  5e-17  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  47.19 
 
 		 92 aa  87.4  6e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal  1 
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  53.49 
 
 		 89 aa  86.7  1e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  46.07 
 
 		 89 aa  84.7  4e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.332403 
 
 
-
 
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  46.07 
 
 		 94 aa  84.7  4e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2810  putative monovalent cation/H+ antiporter subunit F  46.43 
 
 		 93 aa  84.3  5e-16  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.482202 
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  51.85 
 
 		 89 aa  82.8  0.000000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  51.85 
 
 		 89 aa  82.8  0.000000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  49.44 
 
 		 92 aa  82.4  0.000000000000002  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  49.44 
 
 		 92 aa  81.6  0.000000000000003  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  49.44 
 
 		 92 aa  81.6  0.000000000000003  Pseudomonas putida F1  Bacteria  normal  1  hitchhiker  0.00558279 
 
 
-
 
NC_007925  RPC_3853  putative monovalent cation/H+ antiporter subunit F  48.05 
 
 		 89 aa  81.3  0.000000000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  48.31 
 
 		 92 aa  80.9  0.000000000000006  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
NC_011004  Rpal_3132  putative monovalent cation/H+ antiporter subunit F  55.22 
 
 		 93 aa  80.1  0.000000000000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  46.07 
 
 		 89 aa  80.1  0.000000000000009  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal  1 
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  50 
 
 		 92 aa  80.1  0.000000000000009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal  1 
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  47.56 
 
 		 94 aa  79.7  0.00000000000001  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  42.05 
 
 		 94 aa  79.3  0.00000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  46.34 
 
 		 94 aa  78.6  0.00000000000003  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0110721 
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  46.34 
 
 		 94 aa  78.6  0.00000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal  1 
 
 
-
 
NC_008782  Ajs_2478  multiple resistance and pH regulation protein F  46.25 
 
 		 93 aa  77.4  0.00000000000006  Acidovorax sp. JS42  Bacteria  normal  0.648417  normal  0.0636047 
 
 
-
 
NC_011992  Dtpsy_1382  multiple resistance and pH regulation protein F  46.25 
 
 		 93 aa  77.4  0.00000000000006  Acidovorax ebreus TPSY  Bacteria  normal  0.393681  n/a   
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  47.37 
 
 		 93 aa  77.4  0.00000000000006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  43.82 
 
 		 94 aa  77  0.00000000000008  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_011988  Avi_5264  PH Adaption potassium efflux system  43.02 
 
 		 93 aa  76.6  0.00000000000009  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  48.72 
 
 		 92 aa  76.6  0.00000000000009  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
NC_007406  Nwi_2658  putative monovalent cation/H+ antiporter subunit F  46.15 
 
 		 92 aa  75.5  0.0000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  47.44 
 
 		 93 aa  75.5  0.0000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  47.44 
 
 		 93 aa  73.9  0.0000000000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_007958  RPD_0672  putative monovalent cation/H+ antiporter subunit F  42.7 
 
 		 89 aa  73.6  0.0000000000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_1601  multiple resistance and pH regulation protein F  49.25 
 
 		 92 aa  73.2  0.000000000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3621  putative monovalent cation/H+ antiporter subunit F  44.87 
 
 		 93 aa  72.8  0.000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0308607  normal  1 
 
 
-
 
NC_010002  Daci_4733  multiple resistance and pH regulation protein F  46.25 
 
 		 92 aa  72  0.000000000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.74985 
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  54.69 
 
 		 89 aa  70.5  0.000000000007  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_008686  Pden_1285  putative monovalent cation/H+ antiporter subunit F  50.75 
 
 		 93 aa  68.9  0.00000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.399019  normal  1 
 
 
-
 
NC_008752  Aave_3293  multiple resistance and pH regulation protein F  39.02 
 
 		 96 aa  69.3  0.00000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.3108  normal  1 
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  42.05 
 
 		 92 aa  68.9  0.00000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0617372 
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  38.55 
 
 		 93 aa  68.6  0.00000000003  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  38.82 
 
 		 98 aa  67.8  0.00000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  42.31 
 
 		 93 aa  62.8  0.000000002  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  41.67 
 
 		 96 aa  62.4  0.000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  46.97 
 
 		 97 aa  60.5  0.000000008  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.675094 
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  41.79 
 
 		 99 aa  59.7  0.00000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009504  BOV_A0439  putative monovalent cation/H+ antiporter subunit F  48.72 
 
 		 93 aa  59.3  0.00000001  Brucella ovis ATCC 25840  Bacteria  normal  0.324734  n/a   
 
 
-
 
NC_004311  BRA0504  putative monovalent cation/H+ antiporter subunit F  48.72 
 
 		 93 aa  59.3  0.00000001  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3535  putative monovalent cation/H+ antiporter subunit F  50.72 
 
 		 93 aa  54.7  0.0000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.480103  n/a   
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  36.36 
 
 		 90 aa  54.3  0.0000006  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  34.15 
 
 		 87 aa  53.9  0.0000007  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  38.57 
 
 		 118 aa  53.9  0.0000008  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal  1 
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  38.03 
 
 		 91 aa  52.8  0.000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  34.21 
 
 		 88 aa  51.6  0.000003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  38.24 
 
 		 90 aa  50.8  0.000007  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_2927  multiple resistance and pH regulation protein F  34.12 
 
 		 87 aa  50.4  0.000007  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00000965772  normal  0.611551 
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  31.58 
 
 		 88 aa  49.3  0.00002  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_002976  SERP0533  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 		 97 aa  46.2  0.0001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.567164  n/a   
 
 
-
 
NC_008340  Mlg_2095  multiple resistance and pH regulation protein F  28.24 
 
 		 90 aa  46.6  0.0001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.801708  normal  0.210838 
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  33.33 
 
 		 87 aa  45.8  0.0002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_1917  multiple resistance and pH regulation protein F  30.43 
 
 		 85 aa  45.1  0.0003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.851543  normal  1 
 
 
-
 
NC_007796  Mhun_2580  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 		 85 aa  45.1  0.0003  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  32.1 
 
 		 86 aa  44.7  0.0004  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.0688335 
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  36.84 
 
 		 117 aa  44.3  0.0005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal  1 
 
 
-
 
NC_013521  Sked_26970  multisubunit Na+/H+ antiporter, MnhF subunit  31.17 
 
 		 85 aa  44.7  0.0005  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.44503 
 
 
-
 
NC_009632  SaurJH1_0966  putative monovalent cation/H+ antiporter subunit F  36 
 
 		 97 aa  44.3  0.0006  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.122062  n/a   
 
 
-
 
NC_009487  SaurJH9_0947  putative monovalent cation/H+ antiporter subunit F  36 
 
 		 97 aa  44.3  0.0006  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_010003  Pmob_0896  multiple resistance and pH regulation protein F  31.67 
 
 		 65 aa  43.9  0.0008  Petrotoga mobilis SJ95  Bacteria  normal  0.297824  n/a   
 
 
-
 
NC_014211  Ndas_4890  multiple resistance and pH regulation protein F  33.33 
 
 		 121 aa  42.7  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.372031  normal  1 
 
 
-
 
NC_012669  Bcav_3814  multiple resistance and pH regulation protein F  27.63 
 
 		 117 aa  43.1  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  35.29 
 
 		 111 aa  43.1  0.001  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_008942  Mlab_0949  putative monovalent cation/H+ antiporter subunit F  32.31 
 
 		 86 aa  43.1  0.001  Methanocorpusculum labreanum Z  Archaea  normal  0.0187747  normal  0.214865 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  27.5 
 
 		 91 aa  42.7  0.002  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  30 
 
 		 91 aa  42.7  0.002  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  29.27 
 
 		 85 aa  42.7  0.002  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_3718  multiple resistance and pH regulation protein F  28.57 
 
 		 99 aa  41.6  0.004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_11090  multisubunit Na+/H+ antiporter, MnhF subunit  30.77 
 
 		 94 aa  41.2  0.005  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3690  multiple resistance and pH regulation protein F  31.03 
 
 		 107 aa  41.2  0.005  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.973299 
 
 
-
 
NC_010718  Nther_0502  multiple resistance and pH regulation protein F  25.68 
 
 		 87 aa  40.8  0.006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  unclonable  0.0000000000000119623  hitchhiker  0.0000653225 
 
 
-
 
NC_009616  Tmel_1211  putative monovalent cation/H+ antiporter subunit F  32.1 
 
 		 85 aa  40.8  0.006  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
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