Gene PSPTO_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3475 
Symbol 
ID1185140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3923357 
End bp3923635 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content57% 
IMG OID637394828 
Productpotassium efflux system protein PhaF 
Protein accessionNP_793255 
Protein GI28870636 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAC TGCTCGACAA CGCGATCCTG ATCAGCCTGC TGATCTTCGC CCTGGCAATG 
GTCATCACCC TGATTCGCCT GATCAAGGGC CCCTCGGCTC AGGATCGGGT TCTGGCCCTG
GACTATCTGT ACATCATCGC CATGCTGATG ATGCTGGTGC TGGGTATCCG CTACGCCAGT
GACACGTATT TCGAAGCCGC GATGCTGATT GCCCTGTTCG GCTTTGTCGG CTCGTTTGCT
CTGGCCAAAT TCCTGCTGCG CGGAGAGGTG ATCGAATGA
 
Protein sequence
MSALLDNAIL ISLLIFALAM VITLIRLIKG PSAQDRVLAL DYLYIIAMLM MLVLGIRYAS 
DTYFEAAMLI ALFGFVGSFA LAKFLLRGEV IE