Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3475 |
Symbol | |
ID | 1185140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3923357 |
End bp | 3923635 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637394828 |
Product | potassium efflux system protein PhaF |
Protein accession | NP_793255 |
Protein GI | 28870636 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAC TGCTCGACAA CGCGATCCTG ATCAGCCTGC TGATCTTCGC CCTGGCAATG GTCATCACCC TGATTCGCCT GATCAAGGGC CCCTCGGCTC AGGATCGGGT TCTGGCCCTG GACTATCTGT ACATCATCGC CATGCTGATG ATGCTGGTGC TGGGTATCCG CTACGCCAGT GACACGTATT TCGAAGCCGC GATGCTGATT GCCCTGTTCG GCTTTGTCGG CTCGTTTGCT CTGGCCAAAT TCCTGCTGCG CGGAGAGGTG ATCGAATGA
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Protein sequence | MSALLDNAIL ISLLIFALAM VITLIRLIKG PSAQDRVLAL DYLYIIAMLM MLVLGIRYAS DTYFEAAMLI ALFGFVGSFA LAKFLLRGEV IE
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