Gene Smed_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0612 
Symbol 
ID5321448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp661023 
End bp661409 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID640789548 
Productputative monovalent cation/H+ antiporter subunit F 
Protein accessionYP_001326303 
Protein GI150395836 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.716984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG CTGCAGTTCT GAGCACGGCT TCGGGCCTGG CGCTCGTGCT CCTCTCTCTG 
GCGCTGCTGA TGACGGTGCT GCGCATTGTT CGCGGGCCAA CACTTCCGGA CCGGGTGCTC
GGGCTCGATA TGCTGGTTGC GATCGCCATC GGCTTGATCG CGGTAATCGC CGTCAGGACC
GGATTCTATC TCTACATCGA CATAGCAATC GCCCTCGGGC TTGTCGGTTT CCTCGCGACC
GTCGCTTTCG CCCGCTTCAT CCTGACGCGG GGTCTCGCAC CGGAACGCAT GTCGCCGGGT
GCAACGGACG TTTCCCGCCC GAACCCGTCC CCGGCGCGCC CGCGCCCGGG ACAGGCCGGG
CGCCGTAAAC GCAAGGGGGC ACGCTGA
 
Protein sequence
MTPAAVLSTA SGLALVLLSL ALLMTVLRIV RGPTLPDRVL GLDMLVAIAI GLIAVIAVRT 
GFYLYIDIAI ALGLVGFLAT VAFARFILTR GLAPERMSPG ATDVSRPNPS PARPRPGQAG
RRKRKGAR