119 homologs were found in PanDaTox collection
for query gene VC0395_1125 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_1125  putative monovalent cation/H+ antiporter subunit F  100 
 
 
103 aa  199  9.999999999999999e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000095206  n/a   
 
 
-
 
NC_013457  VEA_000414  Na(+) H(+) antiporter subunit F  73.63 
 
 
92 aa  131  3.9999999999999996e-30  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2860  multiple resistance and pH regulation protein F  49.4 
 
 
90 aa  79.7  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.139125  n/a   
 
 
-
 
NC_008340  Mlg_2095  multiple resistance and pH regulation protein F  48.1 
 
 
90 aa  76.3  0.0000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.801708  normal  0.210838 
 
 
-
 
NC_013889  TK90_0753  multiple resistance and pH regulation protein F  50.62 
 
 
91 aa  76.3  0.0000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0206212  normal 
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  46.24 
 
 
90 aa  76.3  0.0000000000001  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  48.19 
 
 
91 aa  74.7  0.0000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_011901  Tgr7_2523  multiple resistance and pH regulation protein F  56.25 
 
 
91 aa  74.7  0.0000000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  47.22 
 
 
91 aa  72  0.000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  39.08 
 
 
90 aa  72.4  0.000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0865  multiple resistance and pH regulation protein F  48.75 
 
 
88 aa  71.6  0.000000000004  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.717084 
 
 
-
 
NC_009727  CBUD_0405  hypothetical protein  45.95 
 
 
100 aa  71.2  0.000000000005  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1770  Na(+)/H(+) antiporter subunit F  45.95 
 
 
100 aa  71.2  0.000000000005  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1279  Na+/H+ antiporter  58.33 
 
 
137 aa  70.9  0.000000000006  Agrobacterium vitis S4  Bacteria  normal  0.981373  n/a   
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  52.05 
 
 
111 aa  70.5  0.000000000008  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  49.3 
 
 
117 aa  69.7  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal 
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  50 
 
 
87 aa  67.8  0.00000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2030  multiple resistance and pH regulation protein F  42.17 
 
 
90 aa  67.4  0.00000000006  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3690  multiple resistance and pH regulation protein F  37.35 
 
 
107 aa  67  0.00000000007  Jannaschia sp. CCS1  Bacteria  normal  normal  0.973299 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  46.75 
 
 
91 aa  67  0.00000000008  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0879  putative monovalent cation/H+ antiporter subunit F  50.79 
 
 
116 aa  67  0.00000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00982664  normal 
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  41.98 
 
 
118 aa  66.6  0.0000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal 
 
 
-
 
NC_009636  Smed_0612  putative monovalent cation/H+ antiporter subunit F  50.75 
 
 
128 aa  64.3  0.0000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.716984  normal 
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  47.95 
 
 
87 aa  59.7  0.00000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  41.79 
 
 
86 aa  58.9  0.00000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0688335 
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  43.24 
 
 
93 aa  58.5  0.00000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1108  multiple resistance and pH regulation protein F  53.7 
 
 
139 aa  55.5  0.0000002  Thauera sp. MZ1T  Bacteria  normal  0.269645  n/a   
 
 
-
 
NC_002976  SERP0533  putative monovalent cation/H+ antiporter subunit F  41.03 
 
 
97 aa  55.1  0.0000003  Staphylococcus epidermidis RP62A  Bacteria  normal  0.567164  n/a   
 
 
-
 
NC_009487  SaurJH9_0947  putative monovalent cation/H+ antiporter subunit F  45.71 
 
 
97 aa  55.5  0.0000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0966  putative monovalent cation/H+ antiporter subunit F  45.71 
 
 
97 aa  55.5  0.0000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.122062  n/a   
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  32.53 
 
 
89 aa  53.1  0.000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0885  multiple resistance and pH regulation protein F  36.9 
 
 
105 aa  52.4  0.000002  Maricaulis maris MCS10  Bacteria  normal  0.15072  normal  0.188818 
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  32.5 
 
 
89 aa  52.8  0.000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal 
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  34.78 
 
 
93 aa  52  0.000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  33.73 
 
 
89 aa  51.6  0.000003  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_009616  Tmel_1211  putative monovalent cation/H+ antiporter subunit F  38.27 
 
 
85 aa  52  0.000003  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0896  multiple resistance and pH regulation protein F  33.85 
 
 
65 aa  52  0.000003  Petrotoga mobilis SJ95  Bacteria  normal  0.297824  n/a   
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  31.33 
 
 
89 aa  51.6  0.000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1612  putative monovalent cation/H+ antiporter subunit F  39.71 
 
 
82 aa  51.6  0.000004  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000561435  n/a   
 
 
-
 
NC_013521  Sked_35420  multisubunit Na+/H+ antiporter, MnhF subunit  40.26 
 
 
155 aa  49.7  0.00001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.279201 
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  38.71 
 
 
97 aa  50.1  0.00001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.675094 
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 
90 aa  48.9  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_009380  Strop_3227  multiple resistance and pH regulation protein F  38.03 
 
 
85 aa  49.3  0.00002  Salinispora tropica CNB-440  Bacteria  normal  0.142719  normal  0.055073 
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  32.86 
 
 
85 aa  48.9  0.00002  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  35.71 
 
 
98 aa  48.9  0.00002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  42.19 
 
 
88 aa  48.5  0.00003  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  31.33 
 
 
89 aa  48.9  0.00003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  31.33 
 
 
89 aa  48.9  0.00003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2435  multiple resistance and pH regulation protein F  35.63 
 
 
118 aa  48.5  0.00003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.38947 
 
 
-
 
NC_014158  Tpau_3718  multiple resistance and pH regulation protein F  35.8 
 
 
99 aa  48.1  0.00004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  32.91 
 
 
89 aa  47.8  0.00005  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  34.83 
 
 
92 aa  47.4  0.00006  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0617372 
 
 
-
 
NC_009718  Fnod_1747  multiple resistance and pH regulation protein F  34.85 
 
 
95 aa  47.8  0.00006  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5264  PH Adaption potassium efflux system  27.5 
 
 
93 aa  47.4  0.00006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3453  multiple resistance and pH regulation protein F  39.06 
 
 
85 aa  47.4  0.00007  Salinispora arenicola CNS-205  Bacteria  normal  0.592211  normal  0.0175933 
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  34.88 
 
 
92 aa  47  0.00009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal 
 
 
-
 
NC_013521  Sked_26970  multisubunit Na+/H+ antiporter, MnhF subunit  37.1 
 
 
85 aa  47  0.00009  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.44503 
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  32.43 
 
 
94 aa  47  0.00009  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  33.33 
 
 
94 aa  47  0.00009  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_007796  Mhun_2580  putative monovalent cation/H+ antiporter subunit F  35.71 
 
 
85 aa  46.6  0.0001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013530  Xcel_3183  multiple resistance and pH regulation protein F  35.38 
 
 
140 aa  46.6  0.0001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2932  multiple resistance and pH regulation protein F  39.39 
 
 
86 aa  46.2  0.0001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  32.43 
 
 
94 aa  46.2  0.0001  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0110721 
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  32.43 
 
 
94 aa  46.2  0.0001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal 
 
 
-
 
NC_007643  Rru_A1640  multiple resistance and pH regulation protein F  35.62 
 
 
97 aa  45.4  0.0002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  25.88 
 
 
88 aa  45.8  0.0002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_013440  Hoch_3536  multiple resistance and pH regulation protein F  44.78 
 
 
88 aa  45.8  0.0002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.155575  normal  0.403499 
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  32.26 
 
 
89 aa  45.4  0.0002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.332403 
 
 
-
 
NC_013169  Ksed_05190  multisubunit Na+/H+ antiporter, MnhF subunit  35.62 
 
 
96 aa  45.8  0.0002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3280  multiple resistance and pH regulation protein F  34.25 
 
 
99 aa  45.1  0.0003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.213846  n/a   
 
 
-
 
NC_012029  Hlac_0839  putative monovalent cation/H+ antiporter subunit F  37.31 
 
 
101 aa  45.4  0.0003  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013131  Caci_4839  multiple resistance and pH regulation protein F  32.35 
 
 
86 aa  45.1  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.10923  normal 
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  33.33 
 
 
92 aa  45.1  0.0004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  34.85 
 
 
89 aa  44.7  0.0004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  32.26 
 
 
89 aa  44.7  0.0004  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  31.82 
 
 
93 aa  44.7  0.0004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_012803  Mlut_11090  multisubunit Na+/H+ antiporter, MnhF subunit  29.35 
 
 
94 aa  45.1  0.0004  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  34.85 
 
 
96 aa  44.7  0.0004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  30.65 
 
 
89 aa  44.3  0.0006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3814  multiple resistance and pH regulation protein F  30 
 
 
117 aa  44.3  0.0006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1917  multiple resistance and pH regulation protein F  39.06 
 
 
85 aa  44.3  0.0006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.851543  normal 
 
 
-
 
NC_013235  Namu_3946  multiple resistance and pH regulation protein F  38.24 
 
 
86 aa  44.3  0.0006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.109243 
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  32.26 
 
 
89 aa  44.3  0.0007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  32.84 
 
 
99 aa  43.9  0.0008  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  32.26 
 
 
92 aa  43.1  0.001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal 
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  32.93 
 
 
93 aa  43.1  0.001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_014210  Ndas_1733  multiple resistance and pH regulation protein F  34.52 
 
 
85 aa  43.5  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  30.43 
 
 
89 aa  43.5  0.001  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal 
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  34.67 
 
 
93 aa  43.1  0.001  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0949  putative monovalent cation/H+ antiporter subunit F  33.82 
 
 
86 aa  43.1  0.001  Methanocorpusculum labreanum Z  Archaea  normal  0.0187747  normal  0.214865 
 
 
-
 
NC_013922  Nmag_3452  multiple resistance and pH regulation protein F  35.21 
 
 
93 aa  43.1  0.001  Natrialba magadii ATCC 43099  Archaea  normal  0.167745  n/a   
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  32.26 
 
 
89 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal 
 
 
-
 
NC_009831  Ssed_3662  MnhF/PhaF family monovalent cation/proton antiporter  36.51 
 
 
86 aa  43.1  0.001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.85894  normal 
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  28.57 
 
 
89 aa  43.5  0.001  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  34.29 
 
 
92 aa  42.7  0.002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3869  hypothetical protein  32.14 
 
 
92 aa  42.7  0.002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  34.29 
 
 
92 aa  42.4  0.002  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.00558279 
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  34.29 
 
 
92 aa  42.4  0.002  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  29.17 
 
 
102 aa  42.4  0.002  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_010506  Swoo_3949  multiple resistance and pH regulation protein F  31.51 
 
 
98 aa  42  0.003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
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