Gene Pmen_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1429 
Symbol 
ID5109718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1590330 
End bp1590641 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content70% 
IMG OID640502658 
Productmultiple resistance and pH regulation protein F 
Protein accessionYP_001186926 
Protein GI146306461 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.600632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.970454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC ATCTGGCTGG TTCCGCCTGG GTCCTGCCCC TGGCCGCCGC CCTGCTCGCG 
CTGAGCGGGC TGATCGTGCT CTACCGTCTG CTGCGCGGGC CTAGCCGCCC GGACCGCGCG
GTGGCCATCG ACGCCCTGAC CCTGCTGGCG GTGGCCGCCA TGGCGCTGCT CTGCCTGATA
CGCGGCGAGG CGCTGTTCGT CGATGTCGCC GTGCTGCTGG CACTGGTGTC GTTCCTCGGC
ACCGCGGCCT TCGCCTTCCT GTTCGATGAC GCCCACAGCC AGCTTCCGGG TAAACGCGAG
GAACGACCAT GA
 
Protein sequence
MTLHLAGSAW VLPLAAALLA LSGLIVLYRL LRGPSRPDRA VAIDALTLLA VAAMALLCLI 
RGEALFVDVA VLLALVSFLG TAAFAFLFDD AHSQLPGKRE ERP