Gene Hoch_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3536 
Symbol 
ID8545925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4870093 
End bp4870359 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content70% 
IMG OID646388204 
Productmultiple resistance and pH regulation protein F 
Protein accessionYP_003267931 
Protein GI262196722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.155575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.403499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT TCTACGAGCT GCTCCTCGGC GGGCTGTGCC TCGCCCTGGT GCTCACCTGC 
GTGCGCTTGC TGCGCGGCCC GACGCTGCCC GATCGCGTGG TCGCCCTCGA TCTGGCGACC
AGCATCGCCG TCGCCTTTGT GCTGCTCTTC GCCATCGCCT TCGAGCTGCC GGTGCTGCTC
GACGTCGCGC TGGCGCTGGC GCTGATCTCG TTCGTCGGCA CGGTCGCGTT CGCCACCTAC
GTCGAGCGCA CGGGGCGACG CCCGTGA
 
Protein sequence
MSAFYELLLG GLCLALVLTC VRLLRGPTLP DRVVALDLAT SIAVAFVLLF AIAFELPVLL 
DVALALALIS FVGTVAFATY VERTGRRP