More than 300 homologs were found in PanDaTox collection
for query gene Gmet_2827 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_2827  response regulator receiver domain-containing protein  100 
 
 
136 aa  278  2e-74  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000107479 
 
 
-
 
NC_009051  Memar_2126  response regulator receiver protein  53.23 
 
 
128 aa  139  1.9999999999999998e-32  Methanoculleus marisnigri JR1  Archaea  normal  0.438867  n/a   
 
 
-
 
NC_007796  Mhun_0886  response regulator receiver domain-containing protein  44.19 
 
 
137 aa  123  7e-28  Methanospirillum hungatei JF-1  Archaea  normal  0.384988  normal  0.153587 
 
 
-
 
NC_012918  GM21_3223  response regulator receiver protein  46.67 
 
 
131 aa  119  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    normal  0.186882 
 
 
-
 
NC_011146  Gbem_1038  response regulator receiver protein  46.67 
 
 
131 aa  119  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0953  response regulator receiver domain-containing protein  44.17 
 
 
135 aa  112  2.0000000000000002e-24  Methanospirillum hungatei JF-1  Archaea  normal  0.83954  normal 
 
 
-
 
NC_007796  Mhun_0159  response regulator receiver domain-containing protein  42.5 
 
 
128 aa  102  3e-21  Methanospirillum hungatei JF-1  Archaea  normal  0.0749254  normal 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  38.14 
 
 
224 aa  83.2  0.000000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  32.77 
 
 
331 aa  80.9  0.000000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_007954  Sden_2689  phosphate regulon transcriptional regulatory protein phoB  35.29 
 
 
229 aa  79  0.00000000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000627834  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  35 
 
 
229 aa  77.8  0.00000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_008819  NATL1_02441  two-component response regulator  33.6 
 
 
242 aa  77.4  0.00000000000006  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.72299  normal 
 
 
-
 
NC_005957  BT9727_4801  response regulator protein  33.59 
 
 
234 aa  77.4  0.00000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000584394  n/a   
 
 
-
 
NC_007335  PMN2A_1537  two component LuxR family transcriptional regulator  33.6 
 
 
242 aa  77.4  0.00000000000006  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2987  LuxR family two component transcriptional regulator  32.77 
 
 
231 aa  77.4  0.00000000000006  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  33.61 
 
 
331 aa  77.4  0.00000000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_008816  A9601_01871  two-component response regulator  33.06 
 
 
242 aa  77.4  0.00000000000006  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.528311  n/a   
 
 
-
 
NC_008345  Sfri_2768  two component transcriptional regulator, winged helix family protein  34.45 
 
 
229 aa  77.4  0.00000000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_012854  Rleg_6330  two component transcriptional regulator, winged helix family  37.61 
 
 
234 aa  77  0.00000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000626879  normal 
 
 
-
 
NC_009091  P9301_01891  two-component response regulator  32.31 
 
 
242 aa  76.6  0.00000000000009  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.991625  n/a   
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  37.5 
 
 
236 aa  76.6  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_009976  P9211_01871  two-component response regulator  34.15 
 
 
242 aa  76.3  0.0000000000001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  32.77 
 
 
231 aa  75.9  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_007513  Syncc9902_2107  two component LuxR family transcriptional regulator  34.45 
 
 
245 aa  75.9  0.0000000000002  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3452  two component transcriptional regulator  36.21 
 
 
229 aa  75.9  0.0000000000002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00686704  hitchhiker  0.000158375 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  36.75 
 
 
170 aa  75.9  0.0000000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_009901  Spea_2969  two component transcriptional regulator  33.59 
 
 
229 aa  75.1  0.0000000000003  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.000000855765  n/a   
 
 
-
 
NC_011658  BCAH187_A5254  regulatory protein VanR  32.81 
 
 
234 aa  75.1  0.0000000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  37.19 
 
 
236 aa  75.1  0.0000000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_007777  Francci3_3728  response regulator receiver protein  36.21 
 
 
128 aa  75.1  0.0000000000003  Frankia sp. CcI3  Bacteria  normal  normal  0.445342 
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  35.34 
 
 
229 aa  75.1  0.0000000000003  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_010086  Bmul_4359  two component transcriptional regulator  34.65 
 
 
229 aa  75.1  0.0000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  35.83 
 
 
237 aa  75.1  0.0000000000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0474  transcriptional regulatory protein OmpR, putative  34.88 
 
 
238 aa  74.7  0.0000000000004  Brucella suis 1330  Bacteria  normal  0.558106  n/a   
 
 
-
 
NC_004347  SO_1558  phosphate regulon response regulator PhoB  34.45 
 
 
239 aa  74.7  0.0000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  33.62 
 
 
241 aa  74.7  0.0000000000004  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_011663  Sbal223_2981  two component transcriptional regulator PhoB, winged helix family  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000220801  hitchhiker  0.00121997 
 
 
-
 
NC_009665  Shew185_1364  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000657343  n/a   
 
 
-
 
NC_009438  Sputcn32_1296  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000460678  n/a   
 
 
-
 
NC_007577  PMT9312_0171  two component LuxR family transcriptional regulator  33.06 
 
 
242 aa  74.7  0.0000000000004  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1403  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.00109837  normal  0.0219543 
 
 
-
 
NC_008321  Shewmr4_2709  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00000407229  decreased coverage  0.000000263688 
 
 
-
 
NC_008322  Shewmr7_2777  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella sp. MR-7  Bacteria  unclonable  0.000000628627  decreased coverage  0.000208697 
 
 
-
 
NC_008577  Shewana3_2879  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000143261  hitchhiker  0.00000615281 
 
 
-
 
NC_009052  Sbal_1378  two component transcriptional regulator  34.45 
 
 
229 aa  74.7  0.0000000000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000291119  n/a   
 
 
-
 
NC_009504  BOV_A0413  putative transcriptional regulatory protein OmpR  34.88 
 
 
238 aa  74.7  0.0000000000004  Brucella ovis ATCC 25840  Bacteria  normal  0.16231  n/a   
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  34.19 
 
 
229 aa  74.3  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_009620  Smed_3764  multi-sensor hybrid histidine kinase  33.33 
 
 
917 aa  74.3  0.0000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.432635  normal 
 
 
-
 
CP001509  ECD_00347  DNA-binding response regulator in two-component regulatory system with PhoR (or CreC)  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3210  two component transcriptional regulator PhoB, winged helix family  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli DH1  Bacteria  normal  0.146413  n/a   
 
 
-
 
NC_010498  EcSMS35_0429  transcriptional regulator PhoB  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli SMS-3-5  Bacteria  normal  0.283039  normal 
 
 
-
 
NC_012892  B21_00351  hypothetical protein  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0318  transcriptional regulator PhoB  33.33 
 
 
229 aa  73.9  0.0000000000006  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1008  two component transcriptional regulator PhoB, winged helix family  34.15 
 
 
229 aa  73.9  0.0000000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0427  transcriptional regulator PhoB  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0435  transcriptional regulator PhoB  33.33 
 
 
229 aa  74.3  0.0000000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3234  transcriptional regulator PhoB  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli ATCC 8739  Bacteria  normal  0.456974  unclonable  0.00000000819474 
 
 
-
 
NC_011353  ECH74115_0475  transcriptional regulator PhoB  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0467  transcriptional regulator PhoB  33.33 
 
 
229 aa  73.9  0.0000000000006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3302  two component transcriptional regulator PhoB, winged helix family  34.15 
 
 
229 aa  73.9  0.0000000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3924  response regulator receiver modulated diguanylate cyclase  29.41 
 
 
443 aa  73.9  0.0000000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.350169  normal 
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.71 
 
 
240 aa  73.9  0.0000000000007  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_011071  Smal_1792  two component transcriptional regulator, winged helix family  33.33 
 
 
249 aa  73.6  0.0000000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.783202  normal  0.482984 
 
 
-
 
NC_013411  GYMC61_2522  two component transcriptional regulator, winged helix family  37.07 
 
 
226 aa  73.6  0.0000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0302  two component transcriptional regulator, winged helix family  37.29 
 
 
221 aa  73.6  0.0000000000009  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4491  two component LuxR family transcriptional regulator  32.23 
 
 
233 aa  73.6  0.0000000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.697305 
 
 
-
 
NC_011368  Rleg2_4585  two component transcriptional regulator, winged helix family  35.43 
 
 
234 aa  72.8  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.209184  normal 
 
 
-
 
NC_011083  SeHA_C0496  transcriptional regulator PhoB  32.52 
 
 
229 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  31.78 
 
 
310 aa  73.2  0.000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_011080  SNSL254_A0441  transcriptional regulator PhoB  32.52 
 
 
229 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.244741  normal 
 
 
-
 
NC_011094  SeSA_A0454  transcriptional regulator PhoB  32.52 
 
 
229 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  36.36 
 
 
236 aa  73.2  0.000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  37.7 
 
 
376 aa  73.2  0.000000000001  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_011205  SeD_A0435  transcriptional regulator PhoB  32.52 
 
 
229 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.464381  normal 
 
 
-
 
NC_009727  CBUD_2107  two-component response regulator  36.13 
 
 
245 aa  73.2  0.000000000001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0142  two component transcriptional regulator, winged helix family  36.44 
 
 
221 aa  73.6  0.000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.709604 
 
 
-
 
NC_008578  Acel_1874  response regulator receiver protein  34.13 
 
 
320 aa  73.2  0.000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.420153  normal 
 
 
-
 
NC_010117  COXBURSA331_A0079  transcriptional regulatory protein  36.13 
 
 
245 aa  73.2  0.000000000001  Coxiella burnetii RSA 331  Bacteria  normal  0.747625  n/a   
 
 
-
 
NC_009457  VC0395_A0253  DNA-binding response regulator PhoB  33.62 
 
 
229 aa  72  0.000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3106  two component transcriptional regulator PhoB, winged helix family  33.33 
 
 
229 aa  72.8  0.000000000002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4627  two component transcriptional regulator, LuxR family  31.93 
 
 
226 aa  72.4  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_005707  BCE_A0213  DNA-binding response regulator  35.9 
 
 
227 aa  72.4  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011777  BCAH820_B0254  DNA-binding response regulator  35.9 
 
 
227 aa  72.4  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000466037 
 
 
-
 
NC_007298  Daro_1632  response regulator receiver  36.36 
 
 
123 aa  72  0.000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0867  transcriptional regulator PhoB  31.71 
 
 
229 aa  72.4  0.000000000002  Enterobacter sp. 638  Bacteria  normal  0.437737  normal 
 
 
-
 
NC_010159  YpAngola_A3286  phosphate regulon transcriptional regulatory protein  33.33 
 
 
230 aa  72.4  0.000000000002  Yersinia pestis Angola  Bacteria  normal  normal  0.0413143 
 
 
-
 
NC_007513  Syncc9902_0153  two component transcriptional regulator  35.54 
 
 
253 aa  72.4  0.000000000002  Synechococcus sp. CC9902  Bacteria  normal  0.711737  n/a   
 
 
-
 
NC_009708  YpsIP31758_3136  phosphate regulon transcriptional regulatory protein PhoB  33.33 
 
 
229 aa  72.4  0.000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0758  two component transcriptional regulator  31.75 
 
 
244 aa  72.4  0.000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.885545  normal 
 
 
-
 
NC_010465  YPK_3276  two component transcriptional regulator  33.33 
 
 
229 aa  72.4  0.000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_17451  two-component response regulator  32.2 
 
 
269 aa  72.4  0.000000000002  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2343  two component transcriptional regulator  34.48 
 
 
243 aa  72.4  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00929975  n/a   
 
 
-
 
NC_008816  A9601_18291  two-component response regulator  33.9 
 
 
248 aa  72  0.000000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.276613  n/a   
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  33.86 
 
 
225 aa  72  0.000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_013595  Sros_1560  response regulator receiver protein  36.21 
 
 
129 aa  72  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4344  two component transcriptional regulator  34.48 
 
 
239 aa  71.6  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.325933  normal  0.345767 
 
 
-
 
NC_013216  Dtox_4198  two component transcriptional regulator, winged helix family  34.19 
 
 
226 aa  71.6  0.000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2915  two component transcriptional regulator PhoB, winged helix family  33.33 
 
 
229 aa  71.6  0.000000000003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4400  two component transcriptional regulator  33.33 
 
 
236 aa  71.6  0.000000000003  Marinomonas sp. MWYL1  Bacteria  normal  0.998417  normal 
 
 
-
 
NC_009783  VIBHAR_01026  response regulator  34.48 
 
 
229 aa  72  0.000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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