More than 300 homologs were found in PanDaTox collection
for query gene Gbro_0481 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_0481  acyl-CoA dehydrogenase domain protein  100 
 
 
363 aa  712    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2807  hypothetical protein  34.65 
 
 
333 aa  157  3e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5261  acyl-CoA dehydrogenase domain protein  33.83 
 
 
338 aa  152  1e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3005  acyl-CoA dehydrogenase domain protein  24.01 
 
 
364 aa  74.7  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3114  acyl-CoA dehydrogenase domain protein  24.01 
 
 
364 aa  74.7  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4987  acyl-CoA dehydrogenase family protein-like  24.04 
 
 
367 aa  73.6  0.000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  0.432457  normal  0.841072 
 
 
-
 
NC_011666  Msil_2837  putative acyl-CoA dehydrogenase  26.02 
 
 
375 aa  67.8  0.0000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.926618 
 
 
-
 
NC_010676  Bphyt_4179  acyl-CoA dehydrogenase domain protein  23.45 
 
 
381 aa  67  0.0000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.011291  hitchhiker  0.000381045 
 
 
-
 
NC_008699  Noca_1456  acyl-CoA dehydrogenase domain-containing protein  20 
 
 
398 aa  66.2  0.0000000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0882  acyl-CoA dehydrogenase domain-containing protein  33.73 
 
 
381 aa  65.5  0.000000001  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.000390729  normal  0.405813 
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  25.46 
 
 
382 aa  65.1  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  23.33 
 
 
380 aa  65.1  0.000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1706  putative acyl-CoA dehydrogenase  28.12 
 
 
375 aa  65.1  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.087432  n/a   
 
 
-
 
NC_010172  Mext_1150  acyl-CoA dehydrogenase-like protein  26.72 
 
 
397 aa  64.3  0.000000003  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.428628 
 
 
-
 
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  28.95 
 
 
384 aa  62.4  0.00000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0319  acyl-CoA dehydrogenase domain-containing protein  26.01 
 
 
383 aa  60.8  0.00000003  Roseiflexus sp. RS-1  Bacteria  normal  0.339666  normal  0.0442463 
 
 
-
 
BN001303  ANIA_04688  Isovaleryl-coenzyme A dehydrogenase (EC 1.3.99.10) [Source:UniProtKB/TrEMBL;Acc:Q6T5L6]  26.37 
 
 
431 aa  59.7  0.00000007  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.480161  normal 
 
 
-
 
NC_009767  Rcas_0249  acyl-CoA dehydrogenase domain-containing protein  25.34 
 
 
383 aa  59.7  0.00000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.538468  normal  0.417839 
 
 
-
 
NC_014212  Mesil_1085  acyl-CoA dehydrogenase domain protein  25.24 
 
 
373 aa  59.3  0.0000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.863384  normal 
 
 
-
 
NC_007794  Saro_1645  isovaleryl-CoA dehydrogenase  23.83 
 
 
387 aa  58.9  0.0000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01905  Acyl-CoA dehydrogenase family protein  28.57 
 
 
397 aa  58.9  0.0000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.271746  n/a   
 
 
-
 
NC_013739  Cwoe_2677  Acyl-CoA dehydrogenase type 2 domain protein  32.41 
 
 
433 aa  58.5  0.0000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.3001  normal  0.883174 
 
 
-
 
NC_009524  PsycPRwf_2062  acyl-CoA dehydrogenase domain-containing protein  22.73 
 
 
395 aa  58.5  0.0000002  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2781  acyl-CoA dehydrogenase domain-containing protein  26.39 
 
 
385 aa  57.8  0.0000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0550  acyl-CoA dehydrogenase domain protein  27.04 
 
 
377 aa  57.8  0.0000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193039  decreased coverage  0.00272664 
 
 
-
 
NC_007204  Psyc_0313  isovaleryl-CoA dehydrogenase  24.54 
 
 
395 aa  57.4  0.0000004  Psychrobacter arcticus 273-4  Bacteria  normal  0.740089  normal 
 
 
-
 
NC_007953  Bxe_C0513  putative acyl-CoA dehydrogenase  30.82 
 
 
387 aa  57.4  0.0000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  23.92 
 
 
377 aa  57  0.0000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1309  acyl-CoA dehydrogenase domain protein  26.36 
 
 
397 aa  56.6  0.0000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  30.36 
 
 
387 aa  56.6  0.0000006  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  21.46 
 
 
371 aa  56.6  0.0000006  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  26.04 
 
 
385 aa  57  0.0000006  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  24.04 
 
 
389 aa  57  0.0000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0459  hypothetical protein  24.57 
 
 
367 aa  56.6  0.0000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  25.53 
 
 
377 aa  56.6  0.0000007  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_012791  Vapar_4730  acyl-CoA dehydrogenase domain protein  23.39 
 
 
376 aa  56.6  0.0000007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  25.53 
 
 
377 aa  56.6  0.0000007  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_013744  Htur_4197  acyl-CoA dehydrogenase domain protein  28.4 
 
 
386 aa  56.6  0.0000007  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.142048  n/a   
 
 
-
 
NC_013457  VEA_000373  branched-chain acyl-CoA dehydrogenase  25.74 
 
 
384 aa  55.8  0.000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  26.75 
 
 
386 aa  55.8  0.000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  30.95 
 
 
387 aa  55.8  0.000001  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_013946  Mrub_1126  acyl-CoA dehydrogenase domain-containing protein  23.72 
 
 
373 aa  55.8  0.000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0658  acyl-CoA dehydrogenase  29.88 
 
 
388 aa  55.1  0.000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1281  butyryl-CoA dehydrogenase  26.79 
 
 
387 aa  54.7  0.000002  Thermobifida fusca YX  Bacteria  normal  0.33384  n/a   
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  26.04 
 
 
385 aa  55.1  0.000002  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_007969  Pcryo_0344  acyl-CoA dehydrogenase-like  22.98 
 
 
395 aa  54.7  0.000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3200  acyl-CoA dehydrogenase domain-containing protein  26.9 
 
 
385 aa  55.1  0.000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.393512  hitchhiker  0.00650034 
 
 
-
 
NC_008699  Noca_0046  acyl-CoA dehydrogenase domain-containing protein  28.47 
 
 
387 aa  54.7  0.000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  26.8 
 
 
385 aa  55.1  0.000002  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_006670  CNA04330  Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative  26.51 
 
 
417 aa  53.9  0.000004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  22.62 
 
 
382 aa  53.5  0.000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1370  Acyl-CoA dehydrogenase type 2 domain protein  28.83 
 
 
395 aa  53.5  0.000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4118  Acyl-CoA dehydrogenase  26.47 
 
 
580 aa  53.1  0.000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.846783  n/a   
 
 
-
 
NC_008346  Swol_1483  butyryl-CoA dehydrogenase  24.23 
 
 
382 aa  53.5  0.000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1085  glutaryl-CoA dehydrogenase  23.58 
 
 
394 aa  52.8  0.000008  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3100  Acyl-CoA dehydrogenase type 2 domain protein  25.68 
 
 
392 aa  52.8  0.000008  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3838  acyl-CoA dehydrogenase-like  22.22 
 
 
376 aa  53.1  0.000008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  25.97 
 
 
416 aa  53.1  0.000008  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_007948  Bpro_3835  acyl-CoA dehydrogenase-like  25.54 
 
 
406 aa  52.8  0.000008  Polaromonas sp. JS666  Bacteria  normal  normal  0.951896 
 
 
-
 
NC_010515  Bcenmc03_4934  acyl-CoA dehydrogenase type 2  29.78 
 
 
403 aa  53.1  0.000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.236936  normal  0.753815 
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  25.76 
 
 
384 aa  53.1  0.000008  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  25.35 
 
 
385 aa  52.8  0.000009  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  25.35 
 
 
385 aa  52.8  0.000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_010086  Bmul_3396  acyl-CoA dehydrogenase type 2  31.71 
 
 
403 aa  52  0.00001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.323455  normal 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  25.35 
 
 
385 aa  52.8  0.00001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1853  acyl-CoA dehydrogenase type 2  27.52 
 
 
416 aa  52.4  0.00001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2132  butyryl-CoA dehydrogenase  27.1 
 
 
388 aa  52  0.00001  Marinobacter aquaeolei VT8  Bacteria  normal  0.627987  n/a   
 
 
-
 
NC_012803  Mlut_06870  butyryl-CoA dehydrogenase  30.57 
 
 
395 aa  52.8  0.00001  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1417  Acyl-CoA dehydrogenase  24.37 
 
 
649 aa  52.4  0.00001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  28.3 
 
 
378 aa  52.4  0.00001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  25.35 
 
 
385 aa  52.8  0.00001  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0732  isovaleryl-CoA dehydrogenase  29.89 
 
 
387 aa  52.4  0.00001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  24.19 
 
 
377 aa  52.4  0.00001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2481  acyl-CoA dehydrogenase-like  23.83 
 
 
406 aa  52.8  0.00001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1649  acyl-CoA dehydrogenase domain-containing protein  23.77 
 
 
415 aa  52  0.00001  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.246483 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  25.35 
 
 
385 aa  52.8  0.00001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  25.35 
 
 
385 aa  52.8  0.00001  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_013739  Cwoe_4224  acyl-CoA dehydrogenase domain protein  21.94 
 
 
400 aa  52  0.00001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0700017  normal  0.0824066 
 
 
-
 
NC_009667  Oant_2170  acyl-CoA dehydrogenase domain-containing protein  23.58 
 
 
394 aa  52.4  0.00001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7011  acyl-CoA dehydrogenase domain protein  25.47 
 
 
382 aa  52  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00655237 
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  27.21 
 
 
376 aa  52  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3656  isovaleryl-CoA dehydrogenase  21.39 
 
 
387 aa  51.6  0.00002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.179163  normal  0.0293073 
 
 
-
 
NC_007511  Bcep18194_B0314  Acyl-CoA dehydrogenase-like  28.96 
 
 
403 aa  52  0.00002  Burkholderia sp. 383  Bacteria  normal  0.733872  normal  0.907507 
 
 
-
 
NC_009656  PSPA7_2929  hypothetical protein  25.45 
 
 
355 aa  51.6  0.00002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_011891  A2cp1_2530  acyl-CoA dehydrogenase domain protein  25 
 
 
646 aa  51.6  0.00002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2949  acyl-CoA dehydrogenase-like  22.49 
 
 
388 aa  51.2  0.00002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1268  acyl-CoA dehydrogenase domain protein  23.62 
 
 
413 aa  51.6  0.00002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.831834  n/a   
 
 
-
 
NC_013235  Namu_0966  acyl-CoA dehydrogenase domain protein  26.03 
 
 
390 aa  51.6  0.00002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  24.48 
 
 
377 aa  52  0.00002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5095  acyl-CoA dehydrogenase domain-containing protein  22.48 
 
 
409 aa  51.6  0.00002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.124298  normal  0.0779135 
 
 
-
 
NC_008554  Sfum_1260  acyl-CoA dehydrogenase domain-containing protein  22.4 
 
 
394 aa  51.6  0.00002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.334789  normal 
 
 
-
 
NC_013093  Amir_4707  acyl-CoA dehydrogenase type 2 domain protein  26.82 
 
 
395 aa  52  0.00002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4064  acyl-CoA dehydrogenase domain-containing protein  22.7 
 
 
424 aa  51.2  0.00003  Pseudomonas putida KT2440  Bacteria  normal  0.322511  hitchhiker  0.0046695 
 
 
-
 
NC_009512  Pput_1777  acyl-CoA dehydrogenase domain-containing protein  22.7 
 
 
387 aa  50.8  0.00003  Pseudomonas putida F1  Bacteria  normal  normal  0.0186488 
 
 
-
 
NC_011145  AnaeK_2443  acyl-CoA dehydrogenase domain protein  25.42 
 
 
648 aa  51.2  0.00003  Anaeromyxobacter sp. K  Bacteria  normal  0.221284  n/a   
 
 
-
 
NC_013744  Htur_4420  acyl-CoA dehydrogenase domain protein  26.32 
 
 
383 aa  51.2  0.00003  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.135113  n/a   
 
 
-
 
NC_007948  Bpro_4185  acyl-CoA dehydrogenase-like  21.89 
 
 
376 aa  50.8  0.00003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1084  butyryl-CoA dehydrogenase  25.84 
 
 
377 aa  51.2  0.00003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0155468 
 
 
-
 
NC_009675  Anae109_2137  acyl-CoA dehydrogenase domain-containing protein  26.53 
 
 
382 aa  51.2  0.00003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.545271  normal  0.220827 
 
 
-
 
NC_008726  Mvan_3173  acyl-CoA dehydrogenase type 2  28.21 
 
 
415 aa  51.2  0.00003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.203103  normal  0.0489615 
 
 
-
 
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