| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1309 |
|---|
| Symbol | |
|---|
| ID | 7115572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1338840 |
|---|
| End bp | 1340033 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643524086 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002420121 |
|---|
| Protein GI | 218529305 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCG CCCTCGCTCT GCGGCCGGCG GATGATTCCG TCGGGCCGGT GCCGCCTGCC
ACGCCGAACC GCCCCGATTG GACCGACGAG GCCGTCCTCG CCGGAACGAA GGCCATCGCC
GATGCTCCCT TGAGCGCGGC GGCGGCGGAG ATCGACCGCG GCGCCTACCC GCTTGAGATC
CTGGGCCGGC TCGGTGGCGC GGGCGCGCTC GCCGTGCATC TCGACCGGCA CGGGGGGCGC
TTCGGCCTCT CGGTGGCGGC CATGCAGGTG GCGAGCCGGG CCTGCGGCGC CACCGGCTTC
CTGATGTGGT GCCACGACGT GTGCGGCCTC TACCTGGAGC AGTCGGGCAA CCCGGCCCTG
ACCGGCGCGG TGCTCGACGA TCACGCCGCG GGCCGCAGCT TCGGAGGCAC GGCGCTCTCC
AACCCGATGA AGGCCTTCGC CGGGATCGAG CCGATCCTGC TGCGCGCCCG TCGCGTCCCC
GGCGGCTACC GGATTAGCGG CATGCTGCCC TGGGTCAGCC ATATCGGGCC GGGCCAGTAT
TGCGGCGCCA TCGCGGGTGT CGTCGGCGCC AACGACACGA TCAGCCACGA GATCATGTTC
GTGCTGGCTT GCGACCGTGC CGAGTTGCGG CCCTGCCCGC ACTTCTCGGG CATGGAGGGC
ACCAGCACCT GGGGGGTTCG GCTCGACGAC CTCTTCGTCG GGCATGACGA CCTCATCGCC
GATCCGGCGC GCCCCTTCAT CGGACGCATC CGCGGCGCCT TCATCCTGCT TCAATGCGGC
ATGGGCCTCG GCGTGGCCGA AGGGAGCCTC GATGCCATGC TGGCGGTCGA GGAGACGCTG
GGCCACGTCA ATCAGTTCCT CGACGATCGG CCCGACGCCG TCGCGGCCGA ACTCGCCGAG
CTGCGCGCCC GCGTGATGCG GCTCGCCGAG ACGCCCTTCG ACGGTTCCAC CGACTACCTG
ATCGACGTTC TCGACGCCCG CGCCCAGGTC TCCGAACTGG CCTTGCGCGC CTCGCAATCG
GCGCTGCTGC ACCAGGGCGC ACGGGGCTAC CTGATGTCGG CCGCGCCCCA GCGCCGGATC
CGCGAGGCGC ATTTCGTTGC CATCGTCACC CCCGCGATCA AGCATCTGCG CTGGGAGATG
GCCCGGCTGT CGCGGGAGAC GCAGCCCACC GTGACGGAAG GGGGCCGGGC ATGA
|
|---|
| Protein sequence | MSSALALRPA DDSVGPVPPA TPNRPDWTDE AVLAGTKAIA DAPLSAAAAE IDRGAYPLEI
LGRLGGAGAL AVHLDRHGGR FGLSVAAMQV ASRACGATGF LMWCHDVCGL YLEQSGNPAL
TGAVLDDHAA GRSFGGTALS NPMKAFAGIE PILLRARRVP GGYRISGMLP WVSHIGPGQY
CGAIAGVVGA NDTISHEIMF VLACDRAELR PCPHFSGMEG TSTWGVRLDD LFVGHDDLIA
DPARPFIGRI RGAFILLQCG MGLGVAEGSL DAMLAVEETL GHVNQFLDDR PDAVAAELAE
LRARVMRLAE TPFDGSTDYL IDVLDARAQV SELALRASQS ALLHQGARGY LMSAAPQRRI
REAHFVAIVT PAIKHLRWEM ARLSRETQPT VTEGGRA
|
|---|
| |