| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA04330 |
|---|
| Symbol | |
|---|
| ID | 3253750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1162805 |
|---|
| End bp | 1165523 |
|---|
| Gene Length | 2719 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638252753 |
|---|
| Product | Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative |
|---|
| Protein accession | XP_567164 |
|---|
| Protein GI | 58259503 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGAGGATGAT GCTACCCAAA GCACATGCCT GCAGCCGTCT TTTGTGCTCC TCCTCTCGTC
TGGTGAGCTC GCGCGAAGAT GAATCGTTCA AATAGGCACA AAGCTCACAC AACGAGTTTG
CAGGGTACTA GGAGACGCTA CTCGTCTTAC AATACAGCTG TCGCCGGCCT AACTGAAGCG
CAAGAAGAGG TTTGTCTACA CATCCTTCTC CCAGGTCTGG GATAGAATAA GCAAATGACG
CATTGGCATC AATCTAGTTC CGAAGTGTCG TTCAACATTT CGCTCAGAAA GAGATCGCCC
CAAGAGCGGC TGAAATCGAC CGGACCAACA AGCTCCCGCA GGTATGTACA TCATTACAAG
ATTAAAAACA TTACTAACAT GGAGGCAGGA CATATTTCCA AAACTCGGCG AAATGGGCTT
GCTCGGCGTG ACGGTACCTG AGAGATGGGG AGGACTAGGG CTGGGCTACT TAGAGCATAC
CATTGCCATG GAAGGCAAGA GACTTATACG ATCAAGAGGA AGTTCATATG CTGAAACTTA
TGATAGAAAT CAGTCGAGCA TCAGCCAGTG TGGCTCTCAG TTACGGGGTG GGCAATACAA
AGTTAGCCTC ATTGACAGAC AGCTCATACC AATGCTTAGG CACATTCAAA CCTCTTAGTC
AATCAGCTAG TGAGATGGGG TAGTAGGTAT TCTTAACCTT CTCTCTCCGT CTTGTGCTAA
TTTCTTTAAC CTCAGCTGAG AAGCAATTGA GCAAGTACCT TCCACCCCTT CTTACTGGCA
AGCACATCGG GTCGTTGGCA ATGTCAGAGC CCAATGCCGG GTCAGACGTA GTGTCCATGC
GCACCAGTGC AACCAGGAGT GATGAAGGAG AAGGCTGGAT TATGAATGGC AGTAAATGCT
GGTAGGTGAC ATCGCCCGAC TGGTTCTTTG TATTTGGATA GATGAACTCA CGTCAATAAG
ACAGGATCAC TAATGCCCCA GTCTCGTCCA CCTTCCTCAT TTATGCCAAG TCAGACACCA
ATGTGGCCCC TTCCAAAGGG ATGACTGCTT TTCTGGTGGA GAAAGGCTGG AAAGGATTTG
AAGTGGGCGA AGGCTTGGAC AAATTTGGAG TAAGCCTAAA AATGAGATTG GAGGGATATT
TTGTTGATTA GCACTTCCAG ATGCGCGGAT CTCCCACGGC AGAGCTGTTT TTTGACAATG
TCAAGATCCC AGAAGGTAGG ACTTGCATGG GCGCGGAAAG TTCGTTCAGC TGATCATAAA
CAGAAAACGT GCTAGGTAAA GTGGGAAATG GGGCTTTAGT ATTGATGTCT GGGCTTGATC
TTGAGCGATT GGTGTTAAGT GGCGGGCCGT TAGGGTCAGT TCTCCCCTTC ATTGGACAAA
AAAGTCAGCG GAAGATTGAC GATGAACCGA AGCATCATGC AAGCTGCCCT AGACATGGCT
TTAGAATATA CTCACGAGCG AAAACAGTTT GGCAAACAGA TAGGAACCTT CCAATTAATG
CAAGGGAAGC TCGCTGGTAC GTCTTGTCGC TCGAAAGATG TTTTTCTGGG TGGTGCTGAT
GCACTCAAGC GTAGATATGT ACACCAAGCT GAGTGCCTCT CGTGCGTATG TATACGCCGT
TGCTCGCGCT TGCGATGCAG GGATGATTTC TCGCAGAGTG AGTGGACTGT ACCAATCGAT
ACCAATCGAT CCTGGCAGCC GTCGTTGGCC GTATCCTTGA TCTTTGACTT CTGTCATTCG
GAAACGGGTA TCAAATTATG TTACTGTTGT ACACATCTTG TCCGTTACTG TACCGAAAAT
CTCGCACGGA CTCATAGCCA AGCCGTCCTA CGTAAATAAT ATTCTGTATG ACTAGTTTCC
GGCTCAGAGA GCCTAGAGAC AAGACAGAAA TAGAGAGTAC TGAGGGTTCT TTCTAGTAGT
GGAAAAATTA TTCGGAAATC AATCGCTGAC GAGCACGTCA GGATTGCGCT GGCGCTATTC
TTTATTCTTC GGATAGAGCT GTTGAAGTAG CTATCGAAGC ACAACAATGT CTGGTAAGTG
CATGGTAGAA CTCCGAATTT ACTTCACCCT TTATCAGAGA GATCATGGTG CTGACAACAT
CCGAATCAAT AGGGAGGCAA TGGTTACATC AACGGTGAGT GATAGGTTGT TCAAAGACAT
TTTCGCCATT ACTTGCTTGT ATTCGTTCTC GAAATTATTC GGAATCCTTC TTTTTTTTAA
TAACGCAACG AAGCGCAAGT CGCGTCTCAT CAACTTTACC TCACTCTGCT GCATACATTT
TAAGCCGTCT TCTTGCTGAC TCTGCATTGC CATTTGTTGG TGGGTCCATG TAGACTATCC
CGCGGGTCGT CTTGTACGGG ACAGCAGACT ATACACGGTC GGTGCCGGTA CGCAAGAAAT
TCGGAGGATG CTGATTGGAA GAGAGTTCAA CGAGGCGTTA AGCGGGTTGT AATAAAAAGG
TCAAGTAGAA TAAAAATACG TATCAACCGT TTATTTAGTG CTTCTTGCCC GCTGCTGAAG
GGTGGTGGAG CCGACGCGAG TTGGGGCGGA GCCGTTCTTG CCGCGGAAAT AGCATCCGCA
ATCCGAATTA ATTGCTAACA AACCAAATCG ACTGTGTATG TAATTCAGTT CGGAATTAAT
TAGAATCTTT CAAAAGGGGA TGATGTGCTT ATAGGGCTTA CTAATATGGA CTGCATGTGA
TCAGACATTT TGTTTGAGC
|
|---|
| Protein sequence | MMLPKAHACS RLLCSSSRLG TRRRYSSYNT AVAGLTEAQE EFRSVVQHFA QKEIAPRAAE
IDRTNKLPQD IFPKLGEMGL LGVTVPERWG GLGLGYLEHT IAMEEISRAS ASVALSYGAH
SNLLVNQLVR WGTEKQLSKY LPPLLTGKHI GSLAMSEPNA GSDVVSMRTS ATRSDEGEGW
IMNGSKCWIT NAPVSSTFLI YAKSDTNVAP SKGMTAFLVE KGWKGFEVGE GLDKFGMRGS
PTAELFFDNV KIPEENVLGK VGNGALVLMS GLDLERLVLS GGPLGIMQAA LDMALEYTHE
RKQFGKQIGT FQLMQGKLAD MYTKLSASRA YVYAVARACD AGMISRRDCA GAILYSSDRA
VEVAIEAQQC LGGNGYINDY PAGRLVRDSR LYTVGAGTQE IRRMLIGREF NEALSGL
|
|---|
| |