More than 300 homologs were found in PanDaTox collection
for query gene PSPA7_2929 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_2929  hypothetical protein  100 
 
 
355 aa  683    Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_008463  PA14_34490  hypothetical protein  94.37 
 
 
355 aa  597  1e-169  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000897326  normal  0.153318 
 
 
-
 
NC_010322  PputGB1_2274  acyl-CoA dehydrogenase  66.86 
 
 
354 aa  446  1.0000000000000001e-124  Pseudomonas putida GB-1  Bacteria  normal  0.921595  normal  0.572718 
 
 
-
 
NC_009512  Pput_2095  Acyl-CoA dehydrogenase-like protein  67.81 
 
 
354 aa  432  1e-120  Pseudomonas putida F1  Bacteria  normal  normal  0.528653 
 
 
-
 
NC_002947  PP_3638  acyl-CoA dehydrogenase, putative  67.52 
 
 
354 aa  431  1e-119  Pseudomonas putida KT2440  Bacteria  normal  0.0587866  normal  0.442088 
 
 
-
 
NC_010512  Bcenmc03_6334  putative acyl-CoA dehydrogenase  56.45 
 
 
371 aa  351  1e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6745  hypothetical protein  55.59 
 
 
371 aa  346  5e-94  Burkholderia cenocepacia HI2424  Bacteria  normal  0.839762  normal  0.367272 
 
 
-
 
NC_008062  Bcen_6511  hypothetical protein  55.59 
 
 
371 aa  346  5e-94  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1538  putative acyl-CoA dehydrogenase  51.26 
 
 
367 aa  328  1.0000000000000001e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0459  hypothetical protein  52.17 
 
 
367 aa  325  9e-88  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5825  putative acyl-CoA dehydrogenase  52.72 
 
 
365 aa  310  2.9999999999999997e-83  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.803301 
 
 
-
 
NC_007953  Bxe_C0102  putative acyl-CoA dehydrogenase  52.65 
 
 
367 aa  299  5e-80  Burkholderia xenovorans LB400  Bacteria  normal  0.988493  normal 
 
 
-
 
NC_010002  Daci_3928  acyl-CoA dehydrogenase, putative  51.02 
 
 
366 aa  295  1e-78  Delftia acidovorans SPH-1  Bacteria  normal  0.438549  normal  0.0461862 
 
 
-
 
NC_008532  STER_0700  acyl-CoA dehydrogenase family protein  44.25 
 
 
354 aa  273  4.0000000000000004e-72  Streptococcus thermophilus LMD-9  Bacteria  normal  0.564675  n/a   
 
 
-
 
NC_007595  Synpcc7942_B2627  hypothetical protein  42.02 
 
 
353 aa  235  1.0000000000000001e-60  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0414836  normal 
 
 
-
 
NC_007520  Tcr_0038  putative acyl-CoA dehydrogenase  29.97 
 
 
360 aa  131  2.0000000000000002e-29  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1309  acyl-CoA dehydrogenase domain protein  34.31 
 
 
397 aa  125  8.000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2837  putative acyl-CoA dehydrogenase  31.64 
 
 
375 aa  124  3e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  0.926618 
 
 
-
 
NC_007948  Bpro_4852  acyl-CoA dehydrogenase-like  32.67 
 
 
395 aa  123  5e-27  Polaromonas sp. JS666  Bacteria  normal  normal  0.150232 
 
 
-
 
NC_010172  Mext_1150  acyl-CoA dehydrogenase-like protein  32.44 
 
 
397 aa  123  5e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.428628 
 
 
-
 
NC_007947  Mfla_2174  putative acyl-CoA dehydrogenase  29.65 
 
 
382 aa  122  9.999999999999999e-27  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2613  putative acyl-CoA dehydrogenase family protein  31.34 
 
 
373 aa  121  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.346291 
 
 
-
 
NC_007778  RPB_0305  putative acyl-CoA dehydrogenase  30.35 
 
 
376 aa  119  9.999999999999999e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1367 
 
 
-
 
NC_013889  TK90_0970  acyl-CoA dehydrogenase domain protein  30.94 
 
 
379 aa  118  9.999999999999999e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.276335 
 
 
-
 
NC_013422  Hneap_2211  acyl-CoA dehydrogenase domain protein  29.5 
 
 
378 aa  113  5e-24  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3484  acyl-CoA dehydrogenase type 2  31.75 
 
 
358 aa  111  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4667  acyl-CoA dehydrogenase-like protein  33.79 
 
 
396 aa  110  5e-23  Methylobacterium populi BJ001  Bacteria  normal  0.0171462  normal 
 
 
-
 
NC_008599  CFF8240_0622  acyl-CoA dehydrogenase  28.78 
 
 
354 aa  109  6e-23  Campylobacter fetus subsp. fetus 82-40  Bacteria  decreased coverage  0.00205931  n/a   
 
 
-
 
NC_013510  Tcur_1452  acyl-CoA dehydrogenase  31.41 
 
 
350 aa  109  6e-23  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_009485  BBta_5417  putative acyl-CoA dehydrogenase family protein  32.29 
 
 
373 aa  108  1e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3792  Acyl-CoA dehydrogenase type 2 domain  31.62 
 
 
358 aa  108  2e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.267616 
 
 
-
 
NC_011894  Mnod_1706  putative acyl-CoA dehydrogenase  33.33 
 
 
375 aa  107  2e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.087432  n/a   
 
 
-
 
NC_009632  SaurJH1_0165  hypothetical protein  25.21 
 
 
344 aa  107  4e-22  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0160  Acyl-CoA dehydrogenase-like protein  25.21 
 
 
344 aa  107  4e-22  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4820  putative acyl-CoA dehydrogenase  35.33 
 
 
375 aa  105  1e-21  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.0078002 
 
 
-
 
NC_010725  Mpop_3866  Acyl-CoA dehydrogenase type 2 domain  31.82 
 
 
362 aa  93.6  4e-18  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0222771 
 
 
-
 
NC_009952  Dshi_1297  acyl-CoA dehydrogenase domain protein  26.3 
 
 
387 aa  71.6  0.00000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.329164  normal  0.246274 
 
 
-
 
NC_013131  Caci_0550  acyl-CoA dehydrogenase domain protein  28.02 
 
 
377 aa  68.2  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193039  decreased coverage  0.00272664 
 
 
-
 
NC_010524  Lcho_0727  hypothetical protein  37.12 
 
 
224 aa  64.3  0.000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0730349 
 
 
-
 
NC_009719  Plav_2780  acyl-CoA dehydrogenase domain-containing protein  23.89 
 
 
390 aa  63.9  0.000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0393743 
 
 
-
 
BN001303  ANIA_04688  Isovaleryl-coenzyme A dehydrogenase (EC 1.3.99.10) [Source:UniProtKB/TrEMBL;Acc:Q6T5L6]  27.22 
 
 
431 aa  61.6  0.00000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.480161  normal 
 
 
-
 
NC_008044  TM1040_0732  isovaleryl-CoA dehydrogenase  23.26 
 
 
387 aa  61.6  0.00000002  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4612  acyl-CoA dehydrogenase domain-containing protein  27.56 
 
 
392 aa  61.2  0.00000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0455  acyl-CoA dehydrogenase domain-containing protein  23.78 
 
 
393 aa  60.8  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0232  acyl-CoA dehydrogenase domain protein  25.27 
 
 
382 aa  61.2  0.00000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.359869 
 
 
-
 
NC_009049  Rsph17029_1168  acyl-CoA dehydrogenase domain-containing protein  26.16 
 
 
385 aa  60.5  0.00000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.437637  normal 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  31.25 
 
 
377 aa  60.5  0.00000005  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_007948  Bpro_4190  isovaleryl-CoA dehydrogenase  24.5 
 
 
393 aa  60.1  0.00000006  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05480  acyl-CoA dehydrogenase  25.97 
 
 
389 aa  60.1  0.00000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  26.26 
 
 
377 aa  58.9  0.0000001  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_007493  RSP_2506  isovaleryl-CoA dehydrogenase  27.27 
 
 
385 aa  59.3  0.0000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.791052  n/a   
 
 
-
 
NC_008782  Ajs_3779  isovaleryl-CoA dehydrogenase  23.78 
 
 
396 aa  58.9  0.0000001  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_0198  acyl-CoA dehydrogenase domain protein  25.36 
 
 
387 aa  58.5  0.0000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.140883  normal  0.886093 
 
 
-
 
NC_011992  Dtpsy_3057  acyl-CoA dehydrogenase domain protein  23.78 
 
 
396 aa  58.2  0.0000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  25.99 
 
 
377 aa  58.2  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  32.92 
 
 
386 aa  58.2  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_009380  Strop_4326  acyl-CoA dehydrogenase domain-containing protein  29.55 
 
 
388 aa  57.4  0.0000003  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0122368 
 
 
-
 
NC_011368  Rleg2_4378  acyl-CoA dehydrogenase domain protein  29.8 
 
 
381 aa  57.8  0.0000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  25.99 
 
 
377 aa  57.4  0.0000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  25.99 
 
 
377 aa  57.4  0.0000004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_012854  Rleg_6510  acyl-CoA dehydrogenase domain protein  23.88 
 
 
381 aa  57.4  0.0000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.41485  normal  0.721434 
 
 
-
 
NC_008346  Swol_0488  butyryl-CoA dehydrogenase  20.34 
 
 
379 aa  56.6  0.0000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00678793  n/a   
 
 
-
 
NC_006368  lpp1787  hypothetical protein  27.27 
 
 
389 aa  56.2  0.0000007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_3842  acyl-CoA dehydrogenase-like  24.15 
 
 
392 aa  56.2  0.0000008  Rhodoferax ferrireducens T118  Bacteria  normal  0.990363  n/a   
 
 
-
 
NC_007969  Pcryo_0344  acyl-CoA dehydrogenase-like  20.51 
 
 
395 aa  56.2  0.0000008  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0279  acyl-CoA dehydrogenase oxidoreductase protein  25.14 
 
 
393 aa  56.2  0.0000009  Ralstonia solanacearum GMI1000  Bacteria  normal  0.236676  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  26.79 
 
 
389 aa  56.2  0.0000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1804  acyl-CoA dehydrogenase domain protein  24.4 
 
 
390 aa  56.2  0.0000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.392184  n/a   
 
 
-
 
NC_008228  Patl_2925  isovaleryl-CoA dehydrogenase  25.46 
 
 
389 aa  56.2  0.0000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1788  hypothetical protein  26.79 
 
 
389 aa  55.5  0.000001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_3289  isovaleryl-CoA dehydrogenase  24.62 
 
 
390 aa  55.8  0.000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3693  isovaleryl-CoA dehydrogenase  23.62 
 
 
390 aa  55.8  0.000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2082  acyl-CoA dehydrogenase domain protein  26.25 
 
 
376 aa  54.7  0.000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007204  Psyc_0313  isovaleryl-CoA dehydrogenase  20.92 
 
 
395 aa  54.7  0.000002  Psychrobacter arcticus 273-4  Bacteria  normal  0.740089  normal 
 
 
-
 
NC_013441  Gbro_0481  acyl-CoA dehydrogenase domain protein  28.24 
 
 
363 aa  55.1  0.000002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4263  acyl-CoA dehydrogenase-like  25.24 
 
 
390 aa  55.1  0.000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.662141  normal  0.561312 
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  25.71 
 
 
377 aa  55.1  0.000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_011138  MADE_02412  isovaleryl-CoA dehydrogenase  25.36 
 
 
389 aa  55.5  0.000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.719746  n/a   
 
 
-
 
NC_013159  Svir_16500  acyl-CoA dehydrogenase  29.59 
 
 
384 aa  55.1  0.000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1168  putative acyl-coa dehydrogenase  22.46 
 
 
372 aa  55.1  0.000002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  25.71 
 
 
377 aa  55.5  0.000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_014158  Tpau_2827  acyl-CoA dehydrogenase domain protein  26.07 
 
 
391 aa  54.3  0.000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226434  n/a   
 
 
-
 
NC_009484  Acry_2188  acyl-CoA dehydrogenase domain-containing protein  27.46 
 
 
390 aa  54.7  0.000003  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2013  acyl-CoA dehydrogenase domain-containing protein  29.21 
 
 
385 aa  54.3  0.000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.392534  normal 
 
 
-
 
NC_013947  Snas_3174  acyl-CoA dehydrogenase domain-containing protein  26.28 
 
 
383 aa  53.9  0.000004  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000929019  hitchhiker  0.000000000938929 
 
 
-
 
NC_007333  Tfu_1281  butyryl-CoA dehydrogenase  26.3 
 
 
387 aa  53.9  0.000004  Thermobifida fusca YX  Bacteria  normal  0.33384  n/a   
 
 
-
 
NC_010581  Bind_1853  acyl-CoA dehydrogenase type 2  25.89 
 
 
416 aa  53.9  0.000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  25.2 
 
 
377 aa  53.9  0.000004  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1333  acyl-CoA dehydrogenase domain-containing protein  24.71 
 
 
396 aa  53.9  0.000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0832215  hitchhiker  0.00420458 
 
 
-
 
NC_010002  Daci_5991  acyl-CoA dehydrogenase domain-containing protein  23.12 
 
 
395 aa  53.9  0.000004  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.0000302563 
 
 
-
 
NC_009953  Sare_4766  acyl-CoA dehydrogenase domain-containing protein  27.43 
 
 
394 aa  53.5  0.000005  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000278675 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  25.34 
 
 
377 aa  53.9  0.000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3018  Acyl-CoA dehydrogenase  23.58 
 
 
407 aa  53.5  0.000006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000377  isovaleryl-CoA dehydrogenase  23.79 
 
 
389 aa  53.1  0.000006  Vibrio sp. Ex25  Bacteria  normal  0.749145  n/a   
 
 
-
 
NC_008825  Mpe_A3360  isovaleryl-CoA dehydrogenase  25.96 
 
 
410 aa  53.1  0.000006  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
BN001308  ANIA_00824  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_1G14850)  23.18 
 
 
439 aa  53.1  0.000007  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_007778  RPB_3933  Acyl-CoA dehydrogenase-like  24.77 
 
 
390 aa  53.1  0.000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.218287  normal 
 
 
-
 
NC_008347  Mmar10_0539  acyl-CoA dehydrogenase domain-containing protein  24.01 
 
 
388 aa  53.1  0.000007  Maricaulis maris MCS10  Bacteria  normal  0.191308  normal  0.162597 
 
 
-
 
NC_009524  PsycPRwf_2062  acyl-CoA dehydrogenase domain-containing protein  19.89 
 
 
395 aa  53.1  0.000008  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4233  acyl-CoA dehydrogenase domain-containing protein  28.79 
 
 
394 aa  52.8  0.000009  Sphingomonas wittichii RW1  Bacteria  normal  0.0274104  normal 
 
 
-
 
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