Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1645 |
Symbol | |
ID | 3918754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1720822 |
End bp | 1721985 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640444386 |
Product | isovaleryl-CoA dehydrogenase |
Protein accession | YP_496919 |
Protein GI | 87199662 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCCA CGCCTGATTT CGACTTTGGA CTGACCGAAA GCGCCCTGAT GATCCGCGAG GCCGCCGGTC GCTTCGCCGA CGAGCAGATT GCCCCCCTCG CCGCCGAGAT CGACCGCAAC GACCGCTTCC CAAGGGAACT GTGGGAGCCG ATGGGCGCGC TCGGTCTGCA TGGCATCACG GTGGAGGAAG AATTCGGCGG CCTTGGCCTG GGCTATCTCG ATCACGTCAT CGCGGTCGAG GAAGTGAGCC GGGCAAGCGG TTCGGTTGGG CTGTCCTACG GCGCGCACTC GAACCTCTGC GTCAACCAGA TACGGCGCTG GGGCAACGAC GAGCAGAAGG CGAAGTACCT GCCGAAGCTG ATCTCGGGCG AACACGTCGG CAGCCTGGCC ATGTCGGAAG CAGGCGCCGG GTCTGACGTG GTCTCGATGA AGCTGCGCGC CGATGCGGTA GCCGGCGGCT TCCGCCTCAA CGGAACGAAA TTCTGGATCA CCAACGGCAC TTATGCCGAT ACGCTGGTGG TCTACGCCAA GACCTCGCCC GAAGCGGGCA GCCGGGGCAT CTCCGCCTTC CTGATCGAGA AGGACATGCC CGGCTTCTCC ATCGGCCAGA AGATCGACAA GATGGGCCTG CGCGGCTCGC CCACCTGCGA ACTGGTGTTC GACGACTGCT TCGTTCCGGA AGAAAACGTA ATGGGTCCGC TCCACGGCGG CGTCGGCGTG TTGATGAGCG GGCTGGACTA TGAACGCGTG GTGCTGGCAG GCATGCAGAT CGGCATCATG CAGGCATGCC TCGACACGGT CATCCCCTAC GTGCGCGAAC GCAAGCAGTT CGGCCAGCCG ATCGGCACGT TCCAGCTGAT GCAGGCCAAG GTCGCCGACA TGTATGTCGC GATTCAGTCG GCCCGGGCCT ATGTCTATGC CGTGGCCAAG GCTTGCGATG CAGGCCAGAC CACGCGGTTC GACGCCGCCG GGGCCATCCT TCTGGCGAGC GAGAACGCCT TCCGCGTTTC GGGCGAGGCC GTGCAGGCGC TCGGCGGCGC GGGCTATACC AAGGACTGGC CGGTGGAACG CTACCTGCGC GATGCCAAAC TGCTCGACAT CGGCGCCGGA ACCAATGAAA TCCGCAGGAT GCTGATCGGC AGGGAGCTGA TCGGCGCACG ATAA
|
Protein sequence | MRATPDFDFG LTESALMIRE AAGRFADEQI APLAAEIDRN DRFPRELWEP MGALGLHGIT VEEEFGGLGL GYLDHVIAVE EVSRASGSVG LSYGAHSNLC VNQIRRWGND EQKAKYLPKL ISGEHVGSLA MSEAGAGSDV VSMKLRADAV AGGFRLNGTK FWITNGTYAD TLVVYAKTSP EAGSRGISAF LIEKDMPGFS IGQKIDKMGL RGSPTCELVF DDCFVPEENV MGPLHGGVGV LMSGLDYERV VLAGMQIGIM QACLDTVIPY VRERKQFGQP IGTFQLMQAK VADMYVAIQS ARAYVYAVAK ACDAGQTTRF DAAGAILLAS ENAFRVSGEA VQALGGAGYT KDWPVERYLR DAKLLDIGAG TNEIRRMLIG RELIGAR
|
| |