291 homologs were found in PanDaTox collection
for query gene Nwi_0459 on replicon NC_007406
Organism: Nitrobacter winogradskyi Nb-255



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_0459  hypothetical protein  100 
 
 
367 aa  724    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2274  acyl-CoA dehydrogenase  53.8 
 
 
354 aa  345  6e-94  Pseudomonas putida GB-1  Bacteria  normal  0.921595  normal  0.572718 
 
 
-
 
NC_010512  Bcenmc03_6334  putative acyl-CoA dehydrogenase  52.99 
 
 
371 aa  321  1.9999999999999998e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6511  hypothetical protein  52.19 
 
 
371 aa  318  6e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6745  hypothetical protein  52.19 
 
 
371 aa  318  6e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.839762  normal  0.367272 
 
 
-
 
NC_009512  Pput_2095  Acyl-CoA dehydrogenase-like protein  52.92 
 
 
354 aa  316  5e-85  Pseudomonas putida F1  Bacteria  normal  normal  0.528653 
 
 
-
 
NC_002947  PP_3638  acyl-CoA dehydrogenase, putative  52.63 
 
 
354 aa  314  9.999999999999999e-85  Pseudomonas putida KT2440  Bacteria  normal  0.0587866  normal  0.442088 
 
 
-
 
NC_010002  Daci_5825  putative acyl-CoA dehydrogenase  54.34 
 
 
365 aa  314  9.999999999999999e-85  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.803301 
 
 
-
 
NC_009656  PSPA7_2929  hypothetical protein  52.17 
 
 
355 aa  312  4.999999999999999e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_008463  PA14_34490  hypothetical protein  52.17 
 
 
355 aa  303  3.0000000000000004e-81  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000897326  normal  0.153318 
 
 
-
 
NC_007952  Bxe_B1538  putative acyl-CoA dehydrogenase  48.99 
 
 
367 aa  296  4e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3928  acyl-CoA dehydrogenase, putative  49.28 
 
 
366 aa  280  3e-74  Delftia acidovorans SPH-1  Bacteria  normal  0.438549  normal  0.0461862 
 
 
-
 
NC_008532  STER_0700  acyl-CoA dehydrogenase family protein  41.35 
 
 
354 aa  272  7e-72  Streptococcus thermophilus LMD-9  Bacteria  normal  0.564675  n/a   
 
 
-
 
NC_007953  Bxe_C0102  putative acyl-CoA dehydrogenase  47.19 
 
 
367 aa  249  8e-65  Burkholderia xenovorans LB400  Bacteria  normal  0.988493  normal 
 
 
-
 
NC_007595  Synpcc7942_B2627  hypothetical protein  40.4 
 
 
353 aa  223  3e-57  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0414836  normal 
 
 
-
 
NC_009720  Xaut_2613  putative acyl-CoA dehydrogenase family protein  29.08 
 
 
373 aa  128  1.0000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.346291 
 
 
-
 
NC_013510  Tcur_1452  acyl-CoA dehydrogenase  29.67 
 
 
350 aa  124  4e-27  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_007948  Bpro_4852  acyl-CoA dehydrogenase-like  29.86 
 
 
395 aa  121  1.9999999999999998e-26  Polaromonas sp. JS666  Bacteria  normal  normal  0.150232 
 
 
-
 
NC_011666  Msil_2837  putative acyl-CoA dehydrogenase  31.29 
 
 
375 aa  120  4.9999999999999996e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  0.926618 
 
 
-
 
NC_010172  Mext_3484  acyl-CoA dehydrogenase type 2  31.9 
 
 
358 aa  119  7e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1309  acyl-CoA dehydrogenase domain protein  30.72 
 
 
397 aa  119  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1150  acyl-CoA dehydrogenase-like protein  29.9 
 
 
397 aa  117  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.428628 
 
 
-
 
NC_011757  Mchl_3792  Acyl-CoA dehydrogenase type 2 domain  31.21 
 
 
358 aa  118  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.267616 
 
 
-
 
NC_007520  Tcr_0038  putative acyl-CoA dehydrogenase  26.11 
 
 
360 aa  117  3.9999999999999997e-25  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5417  putative acyl-CoA dehydrogenase family protein  31.34 
 
 
373 aa  114  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4667  acyl-CoA dehydrogenase-like protein  29.97 
 
 
396 aa  112  1.0000000000000001e-23  Methylobacterium populi BJ001  Bacteria  normal  0.0171462  normal 
 
 
-
 
NC_007947  Mfla_2174  putative acyl-CoA dehydrogenase  27.61 
 
 
382 aa  111  2.0000000000000002e-23  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0970  acyl-CoA dehydrogenase domain protein  27.72 
 
 
379 aa  111  2.0000000000000002e-23  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.276335 
 
 
-
 
NC_013422  Hneap_2211  acyl-CoA dehydrogenase domain protein  27.22 
 
 
378 aa  106  8e-22  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0305  putative acyl-CoA dehydrogenase  27 
 
 
376 aa  105  9e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1367 
 
 
-
 
NC_010725  Mpop_3866  Acyl-CoA dehydrogenase type 2 domain  31.79 
 
 
362 aa  98.6  2e-19  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0222771 
 
 
-
 
NC_009632  SaurJH1_0165  hypothetical protein  26.1 
 
 
344 aa  96.7  6e-19  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0160  Acyl-CoA dehydrogenase-like protein  26.1 
 
 
344 aa  96.7  6e-19  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1706  putative acyl-CoA dehydrogenase  28.99 
 
 
375 aa  93.2  7e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.087432  n/a   
 
 
-
 
NC_010511  M446_4820  putative acyl-CoA dehydrogenase  28.9 
 
 
375 aa  89  1e-16  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.0078002 
 
 
-
 
NC_009665  Shew185_2846  acyl-CoA dehydrogenase domain-containing protein  31.86 
 
 
389 aa  81.6  0.00000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0727  hypothetical protein  33.86 
 
 
224 aa  80.9  0.00000000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0730349 
 
 
-
 
NC_009484  Acry_2188  acyl-CoA dehydrogenase domain-containing protein  30.65 
 
 
390 aa  80.1  0.00000000000005  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2828  acyl-CoA dehydrogenase domain-containing protein  32.8 
 
 
389 aa  79.3  0.00000000000008  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1530  acyl-CoA dehydrogenase domain protein  32.8 
 
 
389 aa  79.3  0.00000000000008  Shewanella baltica OS223  Bacteria  normal  0.295941  normal 
 
 
-
 
NC_008599  CFF8240_0622  acyl-CoA dehydrogenase  23.94 
 
 
354 aa  79.7  0.00000000000008  Campylobacter fetus subsp. fetus 82-40  Bacteria  decreased coverage  0.00205931  n/a   
 
 
-
 
NC_004347  SO_1897  isovaleryl-CoA dehydrogenase  31.37 
 
 
389 aa  79.3  0.00000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_2245  acyl-CoA dehydrogenase-like protein  31.37 
 
 
389 aa  79  0.0000000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2973  acyl-CoA dehydrogenase domain-containing protein  32.8 
 
 
389 aa  78.6  0.0000000000002  Shewanella baltica OS195  Bacteria  normal  0.698816  normal  0.555945 
 
 
-
 
NC_008321  Shewmr4_2322  isovaleryl-CoA dehydrogenase  30.88 
 
 
389 aa  78.2  0.0000000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2394  isovaleryl-CoA dehydrogenase  30.88 
 
 
389 aa  77.8  0.0000000000003  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_008345  Sfri_2727  isovaleryl-CoA dehydrogenase  30.88 
 
 
389 aa  77.8  0.0000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1672  isovaleryl-CoA dehydrogenase  30.88 
 
 
389 aa  77.8  0.0000000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3223  acyl-CoA dehydrogenase domain-containing protein  32.28 
 
 
389 aa  77  0.0000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153994 
 
 
-
 
NC_009831  Ssed_1458  acyl-CoA dehydrogenase domain-containing protein  32.28 
 
 
389 aa  76.3  0.0000000000007  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.499178 
 
 
-
 
NC_009656  PSPA7_3274  citronelloyl-CoA dehydrogenase, GnyD  30 
 
 
387 aa  74.7  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3656  isovaleryl-CoA dehydrogenase  29.9 
 
 
387 aa  75.1  0.000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.179163  normal  0.0293073 
 
 
-
 
NC_008463  PA14_38440  citronelloyl-CoA dehydrogenase, GnyD  30 
 
 
387 aa  74.7  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.306085 
 
 
-
 
NC_008700  Sama_1362  isovaleryl-CoA dehydrogenase  30.65 
 
 
389 aa  73.6  0.000000000006  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.431847 
 
 
-
 
NC_007958  RPD_0356  isovaleryl-CoA dehydrogenase  27.6 
 
 
392 aa  72.8  0.000000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.969667  decreased coverage  0.00000934354 
 
 
-
 
NC_009092  Shew_2570  acyl-CoA dehydrogenase domain-containing protein  28.71 
 
 
389 aa  72.4  0.00000000001  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1812  acyl-CoA dehydrogenase domain-containing protein  29.41 
 
 
387 aa  71.6  0.00000000002  Pseudomonas putida W619  Bacteria  normal  0.0871457  normal  0.415388 
 
 
-
 
NC_009901  Spea_2797  acyl-CoA dehydrogenase domain-containing protein  31.22 
 
 
389 aa  72  0.00000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1787  hypothetical protein  27.23 
 
 
389 aa  70.9  0.00000000003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_3662  acyl-CoA dehydrogenase domain-containing protein  29.41 
 
 
387 aa  70.9  0.00000000004  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000000131881 
 
 
-
 
NC_009439  Pmen_2033  isovaleryl-CoA dehydrogenase  28.44 
 
 
387 aa  70.5  0.00000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.0666462  normal  0.420206 
 
 
-
 
NC_008740  Maqu_2121  isovaleryl-CoA dehydrogenase  27.94 
 
 
388 aa  70.1  0.00000000006  Marinobacter aquaeolei VT8  Bacteria  normal  0.274166  n/a   
 
 
-
 
NC_009485  BBta_6658  isovaleryl-CoA dehydrogenase  25.37 
 
 
390 aa  69.3  0.00000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.53503  normal 
 
 
-
 
NC_002947  PP_4064  acyl-CoA dehydrogenase domain-containing protein  29.05 
 
 
424 aa  68.9  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  0.322511  hitchhiker  0.0046695 
 
 
-
 
NC_004578  PSPTO_2739  acyl-CoA dehydrogenase, putative  28.12 
 
 
447 aa  69.3  0.0000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1788  hypothetical protein  26.73 
 
 
389 aa  69.3  0.0000000001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007925  RPC_4263  acyl-CoA dehydrogenase-like  27.59 
 
 
390 aa  68.6  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.662141  normal  0.561312 
 
 
-
 
NC_009512  Pput_1777  acyl-CoA dehydrogenase domain-containing protein  28.92 
 
 
387 aa  68.9  0.0000000001  Pseudomonas putida F1  Bacteria  normal  normal  0.0186488 
 
 
-
 
NC_011138  MADE_02412  isovaleryl-CoA dehydrogenase  28.22 
 
 
389 aa  68.2  0.0000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.719746  n/a   
 
 
-
 
NC_007778  RPB_3933  Acyl-CoA dehydrogenase-like  25.58 
 
 
390 aa  68.6  0.0000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.218287  normal 
 
 
-
 
NC_010623  Bphy_3562  acyl-CoA dehydrogenase domain-containing protein  27.23 
 
 
393 aa  68.2  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.364762 
 
 
-
 
NC_011004  Rpal_1804  acyl-CoA dehydrogenase domain protein  26.51 
 
 
390 aa  67.4  0.0000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.392184  n/a   
 
 
-
 
NC_007517  Gmet_3289  isovaleryl-CoA dehydrogenase  25.13 
 
 
390 aa  67.8  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1719  acyl-CoA dehydrogenase domain-containing protein  32.76 
 
 
389 aa  67.4  0.0000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3466  acyl-CoA dehydrogenase domain-containing protein  27.72 
 
 
393 aa  67.4  0.0000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.360992  normal 
 
 
-
 
NC_007406  Nwi_3018  Acyl-CoA dehydrogenase  28.57 
 
 
407 aa  66.6  0.0000000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2780  acyl-CoA dehydrogenase domain-containing protein  25.63 
 
 
390 aa  66.2  0.0000000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0393743 
 
 
-
 
NC_009952  Dshi_1297  acyl-CoA dehydrogenase domain protein  28.06 
 
 
387 aa  66.2  0.0000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.329164  normal  0.246274 
 
 
-
 
NC_007005  Psyr_2470  isovaleryl-CoA dehydrogenase  27.23 
 
 
387 aa  65.5  0.000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0293728  normal  0.0125727 
 
 
-
 
NC_007643  Rru_A1948  isovaleryl-CoA dehydrogenase  29.06 
 
 
387 aa  65.1  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.113187  n/a   
 
 
-
 
NC_008228  Patl_2925  isovaleryl-CoA dehydrogenase  29.17 
 
 
389 aa  64.7  0.000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_49560  Acyl-CoA dehydrogenase  31.87 
 
 
393 aa  64.3  0.000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.531636  n/a   
 
 
-
 
NC_006670  CNA04330  Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative  27.94 
 
 
417 aa  64.3  0.000000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_007958  RPD_3693  isovaleryl-CoA dehydrogenase  25.12 
 
 
390 aa  64.3  0.000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4588  acyl-CoA dehydrogenase domain-containing protein  27.23 
 
 
393 aa  64.7  0.000000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1603  isovaleryl-CoA dehydrogenase  26.6 
 
 
389 aa  63.9  0.000000004  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2119  acyl-CoA dehydrogenase domain-containing protein  30.39 
 
 
390 aa  63.9  0.000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.148025 
 
 
-
 
NC_009720  Xaut_4272  acyl-CoA dehydrogenase domain-containing protein  26.01 
 
 
390 aa  63.9  0.000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0196507 
 
 
-
 
NC_008554  Sfum_1371  butyryl-CoA dehydrogenase  26.09 
 
 
389 aa  63.9  0.000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.183303  normal 
 
 
-
 
NC_007347  Reut_A1466  isovaleryl-CoA dehydrogenase  28.23 
 
 
393 aa  63.5  0.000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.429983  n/a   
 
 
-
 
NC_007650  BTH_II0947  isovaleryl-CoA dehydrogenase  28.43 
 
 
393 aa  63.9  0.000000005  Burkholderia thailandensis E264  Bacteria  normal  0.818935  n/a   
 
 
-
 
NC_008061  Bcen_3127  acyl-CoA dehydrogenase-like  26.73 
 
 
393 aa  63.5  0.000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.105998  n/a   
 
 
-
 
NC_008543  Bcen2424_5240  acyl-CoA dehydrogenase domain-containing protein  26.73 
 
 
393 aa  63.5  0.000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.288959  normal 
 
 
-
 
NC_013457  VEA_000377  isovaleryl-CoA dehydrogenase  26.24 
 
 
389 aa  63.5  0.000000006  Vibrio sp. Ex25  Bacteria  normal  0.749145  n/a   
 
 
-
 
NC_010515  Bcenmc03_5032  acyl-CoA dehydrogenase domain-containing protein  26.73 
 
 
393 aa  63.2  0.000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0505  acyl-CoA dehydrogenase domain protein  27.21 
 
 
561 aa  62.4  0.00000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0100  isovaleryl-CoA dehydrogenase  27.45 
 
 
390 aa  62.4  0.00000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_0198  acyl-CoA dehydrogenase domain protein  27.78 
 
 
387 aa  62  0.00000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.140883  normal  0.886093 
 
 
-
 
NC_010552  BamMC406_5121  acyl-CoA dehydrogenase domain-containing protein  27.45 
 
 
393 aa  61.6  0.00000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.975401  normal 
 
 
-
 
NC_010676  Bphyt_4686  acyl-CoA dehydrogenase domain protein  26.47 
 
 
393 aa  61.2  0.00000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0162224  normal 
 
 
-
 
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