37 homologs were found in PanDaTox collection
for query gene GM21_3658 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_3658  phage tail tape measure protein, TP901 family  100 
 
 
733 aa  1445    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011149  SeAg_B4790  phage tail tape measure protein, family  28.97 
 
 
877 aa  163  9e-39  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3313  TP901 family phage tail tape measure protein  27.16 
 
 
863 aa  150  6e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.219365  normal 
 
 
-
 
NC_007519  Dde_3386  Phage tail tape measure protein TP901, core region  26.93 
 
 
733 aa  149  2.0000000000000003e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.576804  n/a   
 
 
-
 
NC_009436  Ent638_2589  TP901 family phage tail tape measure protein  28.73 
 
 
596 aa  148  3e-34  Enterobacter sp. 638  Bacteria  normal  normal  0.0411901 
 
 
-
 
NC_012560  Avin_37360  Phage TMP domain-containing protein  28.74 
 
 
1078 aa  138  4e-31  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2588  TP901 family phage tail tape measure protein  25.51 
 
 
945 aa  129  2.0000000000000002e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.217501  hitchhiker  0.000000261263 
 
 
-
 
NC_010002  Daci_2622  TP901 family phage tail tape measure protein  25.51 
 
 
945 aa  129  2.0000000000000002e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.14845  hitchhiker  0.00000014123 
 
 
-
 
NC_011769  DvMF_1298  phage tail tape measure protein, TP901 family  37.01 
 
 
781 aa  89.7  2e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.0000000000950685 
 
 
-
 
NC_007604  Synpcc7942_0750  Phage tail tape measure protein TP901, core region  40.2 
 
 
950 aa  73.6  0.00000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.173353 
 
 
-
 
NC_011773  BCAH820_4374  phage tail tape measure protein, family, core region  26.49 
 
 
1549 aa  68.9  0.0000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009829  Spro_4911  TP901 family phage tail tape measure protein  37.76 
 
 
814 aa  67.8  0.0000000006  Serratia proteamaculans 568  Bacteria  normal  normal  0.716595 
 
 
-
 
NC_008554  Sfum_3818  TP901 family phage tail tape measure protein  38.6 
 
 
1211 aa  66.6  0.000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0934  Phage tail tape measure protein TP901, core region  47.76 
 
 
1211 aa  66.2  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1886  Phage tail tape measure protein TP901, core region  47.76 
 
 
1211 aa  66.2  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008265  CPR_C0004  phage tail tape measure protein, TP901 family, core region domain protein  29.87 
 
 
1178 aa  58.9  0.0000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1070  TP901 family phage tail tape measure protein  25.61 
 
 
2066 aa  56.2  0.000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.917843  n/a   
 
 
-
 
NC_009632  SaurJH1_1091  TP901 family phage tail tape measure protein  25.61 
 
 
2066 aa  56.2  0.000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013925  Nmag_4272  hypothetical protein  33.06 
 
 
740 aa  54.7  0.000006  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009456  VC0395_1041  phage tail tape measure family protein  23.53 
 
 
605 aa  53.5  0.00001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0994  phage tail tape measure protein, TP901 family  26.45 
 
 
1173 aa  52.8  0.00002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013203  Apar_0588  phage tape measure protein  29.17 
 
 
959 aa  51.6  0.00005  Atopobium parvulum DSM 20469  Bacteria  normal  0.739984  normal  0.209865 
 
 
-
 
NC_010717  PXO_01340  phage-related tail protein  22.76 
 
 
956 aa  51.6  0.00005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.776722  n/a   
 
 
-
 
NC_008751  Dvul_2752  TP901 family phage tail tape measure protein  24.03 
 
 
598 aa  50.8  0.00008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.511781 
 
 
-
 
NC_008751  Dvul_1457  TP901 family phage tail tape measure protein  24.03 
 
 
598 aa  50.1  0.0001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.131361  normal 
 
 
-
 
NC_009997  Sbal195_2891  TP901 family phage tail tape measure protein  23.71 
 
 
1216 aa  49.3  0.0002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1175  phage tail tape measure protein, TP901 family  28.08 
 
 
1343 aa  50.1  0.0002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1457  TP901 family phage tail tape measure protein  25.36 
 
 
1409 aa  49.7  0.0002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.143459  normal  0.730205 
 
 
-
 
NC_011772  BCG9842_B2400  phage protein  23.2 
 
 
1297 aa  49.3  0.0003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0689  putative tail tape measure protein  23.03 
 
 
684 aa  48.5  0.0004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5067  putative tail tape measure protein  23.03 
 
 
684 aa  48.5  0.0004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.882104  n/a   
 
 
-
 
NC_008228  Patl_0709  TP901 family phage tail tape measure protein  21.55 
 
 
709 aa  48.1  0.0006  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2632  phage tail tape measure protein, family  26.51 
 
 
1283 aa  47.8  0.0008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0574  TP901 family phage tail tape measure protein  23.81 
 
 
731 aa  47.4  0.0009  Marinomonas sp. MWYL1  Bacteria  normal  0.0262287  normal  0.426184 
 
 
-
 
NC_013517  Sterm_0868  phage tail tape measure protein, TP901 family  26.63 
 
 
981 aa  47  0.001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2248  TP901 family phage tail tape measure protein  25.08 
 
 
914 aa  46.2  0.002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.678247  hitchhiker  0.00399711 
 
 
-
 
NC_013216  Dtox_4245  phage tail tape measure protein, TP901 family  24.74 
 
 
1478 aa  43.9  0.009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
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