| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1041 |
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| Symbol | |
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| ID | 5134492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1020380 |
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| End bp | 1022197 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531363 |
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| Product | phage tail tape measure family protein |
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| Protein accession | YP_001215877 |
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| Protein GI | 147672374 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAA AGCTGATGAT GGTGATTGGT CTAGTTGACC AAATCACCAA GCCACTGCAA
GGCATCACCA CCGAAATTAA TGGAGCCATG AGTGCCGCTG AAAAAGGCAT GGAACAGGCT
GCAAAGGGTG GTGCTGGCTT GTGGGCGACA GGCGTTGCCA TTCAAAATGC GTTGATGCCC
GCCATTGAAA TTAACCGCAA GATTGGTGAA GTAAAATCAC TCAATGTCGC GGCGGATACC
CTAGAACACC TGAAAAATAC AGCGCTGGAT TTTTCAGGCG AATACGGTAA GTCAGCCACT
GAATTTATCG GGGCGGCTTA CGATATTCAA TCTGCTATCG CAGGGTTAAA AGGCACTGAG
CTTTCAGATT TTACCAAAAG CTCGGGCATT CTTGCGGCGG CGACCAAAGC AGACACCGCA
ACCATTACCA ACTACATGGG CACCATGTAT GGCATTTTTG AAAAAGATGC CGCAGCACTC
GGAAACTCAA ACTGGGTAGA ACGTGTGACA GGCATGACCG CACAAGCGGT GCAGATGTTT
AAAACCGATG GTAATAAAAT GTCTCAGGCG TTCAGTTCGC TTGGTTCATC AGCAACCGCC
ATGGGTGTGG ATATGGCCGA GCAAATGGCC GTGCTTGGTA TGCTCTCCGC CACCATGGGT
GGAGGCGAAG CCGCCACGAA ATACACCGCC TTCCTTGGCG GCGCAGTAAA AGCACAAGAA
AAACTCGGGC TATCTTTCTT CGACTCATAC GGAAAAATGC TACCGATGGC CGATATGTTG
GAGTCAATTC AACAGCGTAT TGGGCATTTC TCGACAGATG AACAATTTGC CATTCTCTCT
GATGCATTCG GTTCGGGTGA GGCGGTAAAA CTTATTCAAA ACCTGCAAAG CAAAACTGAT
GAGCTCGCTC AGAAAGTGGT TGAGCTAGAT AAAAACTCAA CCATGGAAAC CGCCATCACT
ATGGCGAAAG CGATGACAGA TCAATCGCAG CGTTTAGAAA ACTCATGGTT CGCTATTCGA
ACCGCAGCAT TTGGAATGGT TTTACCAGCC TTCAATGCCG TAACAGGCAG CATCGCCGAT
GGCCTAATGT GGCTCACATC CATGACTAAA GAGTATCCCA CATTAACCAC TGCACTGAGT
ACTGTTTCGA TCATCGCTTT ATCTTTTGGC GGTGTGGTTG CCTCTCTCTC GCTCGTGATG
GGAATAGCCA AAATGATGGC AGGAGGTTGG AAAGTGACCA TGCTTGGGCT AACCGGAATA
TTAAAGCTGT TTAGAATATT AACTTTGGAT GCTGCAACGG GAACGTGGGT ATTCAACTCA
GCATTGTGGG CAAACCCGAT AACATGGGTG GTTGCTGGCA TTTTGGCGTT AATCGCTGCA
GTCGGCGCAA TGATTTACTG GTGGGACGAA ATCAAAGCCT CTTTTGCGGA TACCACTTGG
TTCAAAATCA TCGCAGCCGC CATAGATGGC GTGATTGAAA TGCTCAACAT GATCCCCGGC
ATCAACATCG AGTGGCGTGC CGGAGAACTG CCCGATGTGC CAGTACCAGA AACCCAACCC
GCCATCGCAA AAGCCGTTCC TGTACTGCCA GATGTCGCGG CGCTTGAAGC CTCGCGCCCA
AGCATGGATA GCACACTCAT TGACTACAAA CGGCCAGAGA ACACCCCGCA GCTATCCAAA
AACATGGTGA ACAACCTCAA CAGCAGCGAA AGCCGCACAA CCCATAACGT GCGCCAGTAC
GGTGATGTTT ACATCACGCC ACAAGGCGGC ATGACGCCAG AACAGCTTGC AGAATGGGAT
GAACTCAATG CCGGATAA
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| Protein sequence | MDEKLMMVIG LVDQITKPLQ GITTEINGAM SAAEKGMEQA AKGGAGLWAT GVAIQNALMP
AIEINRKIGE VKSLNVAADT LEHLKNTALD FSGEYGKSAT EFIGAAYDIQ SAIAGLKGTE
LSDFTKSSGI LAAATKADTA TITNYMGTMY GIFEKDAAAL GNSNWVERVT GMTAQAVQMF
KTDGNKMSQA FSSLGSSATA MGVDMAEQMA VLGMLSATMG GGEAATKYTA FLGGAVKAQE
KLGLSFFDSY GKMLPMADML ESIQQRIGHF STDEQFAILS DAFGSGEAVK LIQNLQSKTD
ELAQKVVELD KNSTMETAIT MAKAMTDQSQ RLENSWFAIR TAAFGMVLPA FNAVTGSIAD
GLMWLTSMTK EYPTLTTALS TVSIIALSFG GVVASLSLVM GIAKMMAGGW KVTMLGLTGI
LKLFRILTLD AATGTWVFNS ALWANPITWV VAGILALIAA VGAMIYWWDE IKASFADTTW
FKIIAAAIDG VIEMLNMIPG INIEWRAGEL PDVPVPETQP AIAKAVPVLP DVAALEASRP
SMDSTLIDYK RPENTPQLSK NMVNNLNSSE SRTTHNVRQY GDVYITPQGG MTPEQLAEWD
ELNAG
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