| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0588 |
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| Symbol | |
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| ID | 8413442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 655992 |
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| End bp | 658871 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022160 |
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| Product | phage tape measure protein |
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| Protein accession | YP_003179609 |
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| Protein GI | 257784392 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | [TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.739984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.209865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAA CAGTAGTAAG AGGCTCTGTT CTGCTTACTC CTAAGTTCGA CAACCTCGGA
GCTAATGTAA AGCGTGCTTT AGGTAGTGGC TATAAGTCAG CGGTATCTGT GCATACAAAT
GCTGGACGGC AAGCGGCGCA AAACTATGCA GGCGGCTTTG GTGGTGCAAC CGGAGCCATT
ATGGGAGTCG TTTCGAGCAT TACTACACGC GCCCTAGATG CTATTTCTGG CTCAATTGCA
TCAGCAGTAA ATCGTGTAGA TACGATTGCA AACTTTCCAA AAATTATGTC ATCTATTGGC
TACTCAGCTG ATGATGCGCG AGCAACTATT CAGCGTCTTT CAGACGGTAT TGATGGACTT
CCGACATCTC TTGATGCCAT TGTTGGCTCT GTACAGAAGA TTGCTCCTGT ATCTGGCTCG
CTTGCTACGG CAACAGATGT TGCTTTGGCA TTTAACAACG CTCTTTTGGC TGGTGGCAAG
AGTCAAGAGG TAATGAATTC TGCTTTTGAG CAGTATTCTC AGATGCTTTC AACTGGCAGA
GTTGACATGC AGTCATGGAA GATTCTCGCG CAAGCCATGC CAGGACAGCT GAATCAAATT
GCCAAAGCTC TATTAGGCGC TAATGCAAAT CAAGCAGACC TCTACAAGGC TATGCAAAGC
GGCACAATTA CATTTGACCA ATTCAACGCT GCAATTGTAA GCCTTAACAA TGAGGGTCTT
CCTGGGTATG CCTCATTTGC GGAACAAGCA AAAATCTCAA CAGAATCAAT TGGCACTGCC
TGGACAAATG TACAGAACCG CATTAATAAG GCAGTTGCAA AAATCATTGA TCACATTGGT
CAAGCTAACA TTGCCGGCGC AATCAACAAC TTCTCAAGTA GTTTTTCTGG CATCGCTGAT
ACGATAATTA CCTATCTTGA TCCTGTCATT TCCACTGTTG GTTCGTTTAT GAACCAGCTT
CAAAATAACG GGGCAATCAC ATCGTTTGGC AATACTTTAA ATGCTCTAAA AGACGTATTT
GATAGCACTA TCGGACTTAT TGGCGACCTC GTAACAACGT TTACTGGTCT CGATAACTCA
GAGAATGCTT CACGTAGCGC AGCAGATTTG CTTAAGGCCG CTGTTGATGG TGTTAAATCT
GCCATAGAGT TTGCACGAGA CGCAGTTCAA GGCTTAAGAG ACAATCTTAC GGTTGTGGCG
CCTGTCATCG TTGCTGTAGC CACCGCCTTG ATTGCTTATG AGACGATTAA AGCGGTACGC
TCAATAGCAG ATGACTTTGG ACTTTTAAAA AGTGCTGCTT CACTTGCCTT TGATGCTATC
AAGGGCGGAG AAGGCGCCCT ATCAACGCTT TCTATTTTTG GTGAACTTGC CGGCGAAGGC
GGAGTACTTG CAAGTATCTT CGGAACGATT TCAACAGCTA TTAGTGGTGT TGGAACAAGC
CTTCTTGCAC TCGTAGGATC TATCCCTGTT ATTGGTTGGA TTGTTATTGC AATTACCGCG
GTTGTTGCGG TTATAACGTG GCTTTGGAAT ACAAATGAGG ACTTCAGAAA CGCTGTAATC
AACATCTGGA ACACTATTTG TAGTGCTGTT AGTGGTGCTG TAAGTGCTAT TGGAGAGTTC
TTAGGTGGTG TTTTAGGCGG CATTGTTGAG GGAGCTAAGG CTGTTTGGAG CGGTCTTTCT
GGTGCCGTTA TAAGTGCCTG GGATGGCATA GTTACTTTCT TTACTGTCGA CTTACCTAAT
ACGTTTAATC AGTTTGTGTC ATTTTTATCT GGTATTCCTG CTGCAATCGG AGCATTTTTT
GAGGCATTGC CAGGACGTAT TTTGTATGGA TTGACGTTTG CGATTGTTTT TGTTGTTGCG
TTTTTTGCGA GTGTCGGCGC CAAGATTAGT GAATTTGGAG CAACTGTTAT TCAGCGGCTT
ATTTCATTCT TTACCGTTGA TATTCCAAAC GCAATTTTAA GCTTTGTACA GTCTGTTACA
ACGTTTTTTA CGGTCGATGT ACCTAATGCC TTTAATCAAT TTGTGACATT TGTGCAAGAG
TTACCTGGAA GAATTCAAGA AGCACTCGCC GAAATGCTCG TTAATGTTGT CTTATGGGCG
CTCGACGTGT ATACGCAAGC TTGTGAGGCT GGCTCTAATT TCTTAAGTGG TGTTAGTCAA
TTCTTCTCGC AACTACCAGG TCAGATTTGG TCGTGGCTTA TGGGAGCTAT AGCGTCTGTT
TCAAGCTTTG TCTCAAATAT TGCTTCACAG GCGGTATCAG CTGGTAATGG CTTTTTAAAT
GGAATCTCTA GTGGCTTTAA TTCAGCAATA AGCTTTATCA GTAGTATTCC AGGACAAATT
ACTAGCTTTT TTGCTGGCTG TGGAAGCTGG CTTATTAACT CTGGTCGTGC ACTTCTAGAT
GGTTTTGCAC AAGGTATTAG AAACGCTGTA AGTACTGTTA CAAACGCTGC GTCCGATGCA
CTTAGTGCCG TTCGTAAGCT TTTTCCATTC TCGCCTGCGA AGAAGGGACC ATTCTCAGGT
CATGGCTACA CGACATATTC TGGTCGTGCT CTTATGCGTG ACTTCGCAAA GGGAATCAAG
GGAAGTTCAT CGCTTGCTGA GACAGAGGCA ATGAGTGCAC TGTCAAGTGT GCATGACGTC
TTTAACAACG CTCGTCCTTT GAGCTTTTCA GCAGTTGCTG ACGCTAATAC AAACGGTATT
TATCGTGCGG CTTTTGAGCT TGACTCAAGG CAGCAACGTG CTAATGCAAC AACACTTGCA
GACATCTATG ACTTTATGCG CAACGGTGAG CTTGGACAGG TTATTGATGA GAATTCTAAT
AACATCGGTG ACCGAGACTT TGCGAGAGCG GTTCAAAAGG CGGTGAGAAC AAATGCATAA
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| Protein sequence | MAGTVVRGSV LLTPKFDNLG ANVKRALGSG YKSAVSVHTN AGRQAAQNYA GGFGGATGAI
MGVVSSITTR ALDAISGSIA SAVNRVDTIA NFPKIMSSIG YSADDARATI QRLSDGIDGL
PTSLDAIVGS VQKIAPVSGS LATATDVALA FNNALLAGGK SQEVMNSAFE QYSQMLSTGR
VDMQSWKILA QAMPGQLNQI AKALLGANAN QADLYKAMQS GTITFDQFNA AIVSLNNEGL
PGYASFAEQA KISTESIGTA WTNVQNRINK AVAKIIDHIG QANIAGAINN FSSSFSGIAD
TIITYLDPVI STVGSFMNQL QNNGAITSFG NTLNALKDVF DSTIGLIGDL VTTFTGLDNS
ENASRSAADL LKAAVDGVKS AIEFARDAVQ GLRDNLTVVA PVIVAVATAL IAYETIKAVR
SIADDFGLLK SAASLAFDAI KGGEGALSTL SIFGELAGEG GVLASIFGTI STAISGVGTS
LLALVGSIPV IGWIVIAITA VVAVITWLWN TNEDFRNAVI NIWNTICSAV SGAVSAIGEF
LGGVLGGIVE GAKAVWSGLS GAVISAWDGI VTFFTVDLPN TFNQFVSFLS GIPAAIGAFF
EALPGRILYG LTFAIVFVVA FFASVGAKIS EFGATVIQRL ISFFTVDIPN AILSFVQSVT
TFFTVDVPNA FNQFVTFVQE LPGRIQEALA EMLVNVVLWA LDVYTQACEA GSNFLSGVSQ
FFSQLPGQIW SWLMGAIASV SSFVSNIASQ AVSAGNGFLN GISSGFNSAI SFISSIPGQI
TSFFAGCGSW LINSGRALLD GFAQGIRNAV STVTNAASDA LSAVRKLFPF SPAKKGPFSG
HGYTTYSGRA LMRDFAKGIK GSSSLAETEA MSALSSVHDV FNNARPLSFS AVADANTNGI
YRAAFELDSR QQRANATTLA DIYDFMRNGE LGQVIDENSN NIGDRDFARA VQKAVRTNA
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