| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1886 |
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| Symbol | |
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| ID | 3756889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1935555 |
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| End bp | 1939190 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637782770 |
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| Product | Phage tail tape measure protein TP901, core region |
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| Protein accession | YP_388378 |
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| Protein GI | 78356929 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGTG ATCTCGGACT GGGCATAGTG GTATCGATGA AGGATGCGTT TTCGCAGAAC
GCGCAGCGCG TCCGTGGTTC CATGATGGAT CTGGACTCCA CCGTGGCCGA TGCCAGCGAG
CGGATGACCC GCAATCTGGA CCGCATCCAG CAAGGCACCA TGATGCTGGG GGCTGGATTG
GCCCTGATGG CCGTGCCCGC CGCACTGGTC GCCTCCACCG CCGCGACTCA AAAGGCACTG
GGTGAGCTGG CATCGCTGGG CGTTCAGGAT CTGCGGGCCA TCGAAGATGC CGCCGAATCC
TTCACCAACC AATGGTCCGG TGCCGATAAG GCCGCCTTTG TGGCCGCCAC CTACGACGTG
AAATCGGCCC TGTCCAACCT GAGCGACGAG GCCGTGGGTG TTTTCACTTC CATGGCCGCC
ATGACCGCAA AGGCAACCAA GGCCACCACC CAGGAGATGG TGGGCACCTT CACCACGGCC
TACGGGATTT TCAAACCCAT CATGGCCGAC ATGACCGACA TGGAATGGGC GACCGCCTTT
TCCGGGGCCA TGGCGCAGAC CGTGGCCTCG TTCAAGACCA ATGGCACCCA GATGGCGGAC
GCCATCAAAA ACATCGGTGC GGTCGCGGCG GCGAGCAATA TCCCGCTAAA CGAGCAGCTC
GCCGTGCTTG GTCAGCTTCA AACCACTATG CCCGGTTCCG AGGCGGGCAC GCTGTACAAG
GCGTTCATCA TGAAGGCCGC CGAGGCTGGT GATGAACTCG GCCTGTCCTT CACCGACACC
AGCGGCCGCC TCAAGGGCGT GGTTCCCATC CTGCAGGAGA TCAAGCGCCA GTTTCCCGAT
CTTTCCAACG CCGCCGCGCA GGTGAAACTG AAAAAAGCTT TCGGCTCCGA CGAGGCGGTT
AAATTCCTGT TGCAGATGTC GGCGGGAGTG GATTCCCTCG AGGGCAGTAT CCAGTCGGTT
GGTCGCGCCA TGAAAACCGG CACGGCGGTC ACCGAACAGA TGGCCGACGC CATGAACCAG
GACATCGGAG CCCGATTCCT GCTCGTGCGC CAGCAGATGG CAAACCTCAG TGAAATTCTG
GGACGCACCT TGCTGCCGGT GGTGACGCCG GTCTTGGGCG GCATCTCCCG CGTCATTCTC
TCCCTGCAGC GCCTGGCCAA ATCGATGCCG GGCGTGACCC GGGCTGTCCT TGGACTATCC
TTGGCCATCG GCACCATTCT GGTCGTGGCC GGAGCCGTCA CCGCCGCCGT GGGCATGGTA
GGACTCATGC TTCCCGCCAT CAAGGCCGGG GTCGTGGCCA TCAGCGCCGC GCTGGCCGGG
GTGGGTTCGG CGGTCGCGAC CTATTTTCTT CCCGTCACCG CGATCATCGC GGGTGTGATC
TTGTCGGTGT ATCTGCTCAA ACGCGCCTGG GAAACAAACT TCGGCGGCAT TCAGGAGATC
ATCATCGGGG CCTGGAACAA GGTCTCGCTG GTGTTTCAAG GTATGAAGGC GTTGGTGGAT
TCGCTCAGCG GCGGCGTGGG TCAGATGTCG GCCGAGCTGG CGCAGAAGCT CGAATCCGCC
GGGCTGCTGG GCTTCGTGGT CACCGTCTTC AAGGCCTATT ACCGGGTTCG TGAGGCCATG
GCCGGATTGT GGGGCGCGTT CTCCCATGCC TTTGGGCGCA TCCGAGCCAT CCTCGAACCG
ACCGTCCGCA CCCTGATGAG CGCCTATGCG GCACTGGCCA GCGCGGTCTT TTCGGTGGTG
GAGATTTTCG GTGTGGCGGC CAGCGCCACC GATGGTTCGT CCTGGCGAAC GTTCGGCACA
GTCATCGGCA CTGTCGCCGG TGTGCTTCTT CAGGGGTTGG CTTTCGCACT CAAGATCGTG
GCCTGGAACC TGTCTCTCAT CGTCCGAGCC CTGGCGGTCG TAGTGCGCAG CGTGGTCTGG
GTCGGCAAGA TCATCGTCGG CACTTTGGTC GGTGCCGCCA AGTTCATCTA CAAGTTTCTG
TTGCCCGTGC GGATGATCGG CGAGGCCTTC GTGGCCGCTG GGAAGATCGT CTATGCGGTC
TGGCAGGTGC TGAGCGGAGA TATCTCTCTG CTCGACGGCC TGAAGGCCAT TGGCGGCGCG
GTCTACGATT TTCTGGCCAC CCCGTTTCGC TGGGCGCGGG ATGTGGTGGT CGGCGTCTGG
AATTTCATTT CCGGCATTTT CACCTCCATC GGCCGCCTGG TGGCCGACGC CGCCGGACAG
ATCGGCCAGG CGATTCTGAA TCTGCCGATC ATCAGCACCC TGCGGGATCT GTTTGCCACC
GTGCGCTCCT TCTTCGCCGG GGATACCACC TTTTTCGAGG CGGGCAAGAA GCTACTGATC
ACCCTTGGCG AAGGGATCTG GTCGGCGGTG ACCTATCCCT TCACCATGCT TAAGAACGCC
CTCGGCAAGC TGCGCAATCT GCTGCCGTTC TCCGATGCCC GCGAGGGACC ACTCGCCAGC
CTGACCGCCT CCGGTTCCGC GCTGCTCAAG ACCCTCGCCG ACGGCATGAG CCTTACCCAG
TCGCTGCCCG CGAAAGTTTT CGGCTTCGCC GCTCGCGGGA TTCTCTCGGA CGCTGCGGGA
GCCTGGCAGC AGATCAAATC GGCGGGCGGC AACCTCATGG AAGCCGCCTC GGCTCCCTTC
CGGATGGCTG GAAAACTCTG GGATGGGCTG ACCACCGGGG CTCAATCCGT CGCGGCCAAG
GCCGGTGCCA TCTTCGGCGG TCTCAAACAA TCCCTGTTTG GCGACACGCC CGAACTGGCG
CTCACGCCGC CCCAGGTCAA TACCTGGGAC GCGCTGGCCA CAGGAGCCGT CAATCTCCGC
GACCGGATCG TTGCCACGCT GTCTGCCGTC CCCGGGGCTG TCGGTCGAAT CTTTACCAAC
GCCGGTGCCG AGGGGCAAAC CCTCTGGCAG AGGCTTTCCA CCGGCGCGAG CGCGGGCATT
CAGGCGATCA AGGATAGAAG CGCTGGGATC GCCAACGGTT TGCTCTCCTC CGCTCGTGCC
ATGCTGGGAG TCCAGACCCC GATTCCGCAG GTGGCCGAGC AGAAGCAAAC ACTCGGAGCT
GCGCAGCCCG CCGAATCGAT TGGGCAACGC ATCATCGAAA GCGTGCTGAG TCTCGTGCCG
CGTCTGGACG AGCGCCTGGT GCCCAAGGCC CTGAGCGCCA TGCTGATGCT CCAGCCGGTC
ATGGCCACTG CCGCGCCGCC TCCGCAACCG ATGAACGGCA TCGTGCAGAC CGTCGCAGCG
GCCGTCGAGC CGGTAAGTAA GAGCTATATC CAGCCGTTCG CGGTGGAACC GCCACTGGAA
AACGGAGATG CCTCTCTGGC TCCGGCCGGG ATCGAGCGGC CCAAGACAAC CGCGCCGACT
CCGATAGCGA AGCCCCTGCA ATCCGGACTC ACCGAGACGG TGCCTTCCGA ACGGTTGATC
GCTCCGGCCC GCACCGCTCC CGCGACACCC ATGCGCGGAG AGGAAGCCGG TCCGGGAGTG
CGCGAACTGC TGGAATCCCT GCTCTCGCGC CTCGATGGCC TGGCCGACCG CCCGGTGGAA
TTGAGCGTGA CCACCAACAT CGATGGTCGG AAGGTGGCCG AGGCGGTCTA CAAGGACCTG
CGGGAGCGGA AGATCAGAAA CTACGAAACC CTGTGA
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| Protein sequence | MNGDLGLGIV VSMKDAFSQN AQRVRGSMMD LDSTVADASE RMTRNLDRIQ QGTMMLGAGL
ALMAVPAALV ASTAATQKAL GELASLGVQD LRAIEDAAES FTNQWSGADK AAFVAATYDV
KSALSNLSDE AVGVFTSMAA MTAKATKATT QEMVGTFTTA YGIFKPIMAD MTDMEWATAF
SGAMAQTVAS FKTNGTQMAD AIKNIGAVAA ASNIPLNEQL AVLGQLQTTM PGSEAGTLYK
AFIMKAAEAG DELGLSFTDT SGRLKGVVPI LQEIKRQFPD LSNAAAQVKL KKAFGSDEAV
KFLLQMSAGV DSLEGSIQSV GRAMKTGTAV TEQMADAMNQ DIGARFLLVR QQMANLSEIL
GRTLLPVVTP VLGGISRVIL SLQRLAKSMP GVTRAVLGLS LAIGTILVVA GAVTAAVGMV
GLMLPAIKAG VVAISAALAG VGSAVATYFL PVTAIIAGVI LSVYLLKRAW ETNFGGIQEI
IIGAWNKVSL VFQGMKALVD SLSGGVGQMS AELAQKLESA GLLGFVVTVF KAYYRVREAM
AGLWGAFSHA FGRIRAILEP TVRTLMSAYA ALASAVFSVV EIFGVAASAT DGSSWRTFGT
VIGTVAGVLL QGLAFALKIV AWNLSLIVRA LAVVVRSVVW VGKIIVGTLV GAAKFIYKFL
LPVRMIGEAF VAAGKIVYAV WQVLSGDISL LDGLKAIGGA VYDFLATPFR WARDVVVGVW
NFISGIFTSI GRLVADAAGQ IGQAILNLPI ISTLRDLFAT VRSFFAGDTT FFEAGKKLLI
TLGEGIWSAV TYPFTMLKNA LGKLRNLLPF SDAREGPLAS LTASGSALLK TLADGMSLTQ
SLPAKVFGFA ARGILSDAAG AWQQIKSAGG NLMEAASAPF RMAGKLWDGL TTGAQSVAAK
AGAIFGGLKQ SLFGDTPELA LTPPQVNTWD ALATGAVNLR DRIVATLSAV PGAVGRIFTN
AGAEGQTLWQ RLSTGASAGI QAIKDRSAGI ANGLLSSARA MLGVQTPIPQ VAEQKQTLGA
AQPAESIGQR IIESVLSLVP RLDERLVPKA LSAMLMLQPV MATAAPPPQP MNGIVQTVAA
AVEPVSKSYI QPFAVEPPLE NGDASLAPAG IERPKTTAPT PIAKPLQSGL TETVPSERLI
APARTAPATP MRGEEAGPGV RELLESLLSR LDGLADRPVE LSVTTNIDGR KVAEAVYKDL
RERKIRNYET L
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