| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2248 |
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| Symbol | |
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| ID | 4688657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2398582 |
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| End bp | 2401326 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835258 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_982477 |
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| Protein GI | 121605148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.678247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00399711 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCTGCCA ACCCGATTCA CCCTGTCCGA GAACCTTCAA ACGTGGCCTT TAAACCCATC
GAGATCCTGA TCAACGCCAA GGACAATGCC TCCTCGGTGT TCGACAGCCT GCGCGCCAAG
GTGGCGACGG TAGGCCTGGC GATCCTGAGT TACTTTGGCG TGCAGGCCTT TGCCGGCGTG
GTCAAGGGCG CGGGGGATTT TGAAGAAGCC ATGAGCCGCG TGAAGTCGGC CACCGGCGCC
AGCACGACCG AGATGCAGGC CCTGCGCAAG GCCGCCGAGG ACGCCGGCGC CAATACCAAA
TTCACCGGCA CCGAGGCCGC TGGCGCGCTG GAAAACCTCG CCAAGGCGGG CCTCAGTGCC
AAGGACGCCA TTGCCGCGCT GCCCGCCGTG CTGGAGCTGG CGCAGGCGGG CGACATCGGC
CTGGGCGAAG CCAGCGAGTT TGTCACCAAG GCCGTGATGG GCCTGGGCCT GGCGTTCACC
GACGCGGGTC GCGTGGCGAA CGTGCTGGCC CTGGGCGCGA ATGCCACCAA CACCAGCGTC
ACCGGCCTGG CGCAGGCGCT CTCCTATGCC GCGCCGGTCG CGCAAAGCCT GGGCTTGTCG
CTGGAAAGCA CCGTCGCCAT CATCGGCAAG TTCGCCGACG CCGGCATCGA TGCCTCGCGC
GCCGGCACGG CCCTGAACAG CATCCTGAGC CAGTTCGGCG ACCCGGCCAG CAAGTTCCGC
CAGGAACTGG CCGCCAGCGG CATCACAACG AATAAATTCG AGGATGCGCT GCACCAGCTC
GCCAAGGCCG GCCCGAGCGG CGCCAAGGCG ATCAACGCGG TGGGCACCGA GGCCGGCCCG
GCGCTGCGCG CCTTGCTCAA CCAGGGCATG CCGGCGCTCG ATGCGCTGAC GGCCAAGCTG
AAAAATGCCG AGGGCGCCGC TGCCGCTGCG GCCAAGGTCA TGCAGGACAA CCTGAACGGC
TCCTTGAATG GCCTGTCCAG CGCCTGGGAC ACGCTCAAGA TTGCGCTGGG CACGCCGGTG
CTGCCGGTGC TCAAGGATGG CGTGGACCAG CTGGCCGGCG CGCTCAAGGC GGCGGTCAGC
GATGGCACGG TCGCTCGCTT TGGCGAGGCC ATTGCAACTG CTTTTCAAAA CGGCATCAAG
TGGGTGCGCG AGTTTGCCGC GCAGGTCGAT TTCAAGCAGG TCACCGCTGA TCTTCGCGCC
TTTGCCGACC GCACGGGCGA GATCTTCACC CAGGTCGGCC AGTACGCCAG CACGGCGGGC
AATACCGTGC AGCTCGCCTA TGGCGTCATG TCGGCGGGAA CCAACACCGT GCTGGGCAGC
ATTTACGCGC TGGGCAGCGG GTTTGCCACG ATTGCGGCCG GCATCCAGTC GGGCCTGGCT
GCGCTGTACG AGGCTTCCAG CAAGGTCACT TTCGGCGCGG TGTCGCAGCA GTACAAGGCG
ATTGCCGCCG AGATCCGGGA GTCGTCCAAC GCCACGGCCG CTGCCGCGCA GGCGCTGAGC
GACAAGTCCC GCGCCGCGTT CCTGGACGTG GCCGATGGCG CTGGCCTGGC GCGCGACGGC
TTCACGGGCC TTGCCAGTGC GGCGACAGGT GCCAAGCCTG CCATTACCGC CGCTGCGGTG
GCGGTGGATG ATATGGGCGC CAAGCTCGAA GCCACCCGCC AGAAAAGCCA GACCGCGCAA
AAGGCCACTG AAGACAAGAA GACTGCCGAC GAAGCCGCAA CCACCGCGCT GCGCCAGCTC
AGGGACGAAT ACGCCGCCTT GGTCGCAAAC GGCGACCTGC AGGCCGCCGC CGAGAAGATC
AAGGACATCA ACAAGGCCCT GCAGGCTACG CCGGCGGCGG CGAAGGACTC GGCCAAGGCT
GCGCAGGACG CGGCCAAGCT GACAGCCGAA GCCTTCGAGG CGCTGGGCAT TTCCAGCCAG
GCCAGCCTGA AGCTGGTCGC CGGCTCGGCA AAGGTCTATT ACGACCGCAT CAAGGCCGAT
GGCACCTCGA CGGCCGTTGA CATTGCGAAC GCCTTCAAGG CCTATGCCGA AAAAGCCATT
GCCGCCAACA ACGGCGTGGC GACCGAGGCG ATCAAGACCG AGGCCGCCAT GCGCGGCCTG
GAGGTGCAAA CCGACAGCGC CGGCAAGTCG ATCGTCAAGG CCATGGGCGA GGGCCAGGCC
GCCGCTGCCA AGCTGGGCGA GCAGTTCCGC ATGACCGCCG AGCAGGTCAA GGCGAACGAA
GACGCCATGG ACCGGCTGAA CATGAAATAC ACCCTGTCGG CCAACTACAC CGAGCGCCAG
CTCAGCTTGC TGGAAAAGGA GAACGCCCTG GTCGAGCGGC GCAATGCCCT GGAGCGCGAG
CGCCTGAACA TCGACAAGGA AGGCTACAGC CTGAACACCG CCGGCCAGCG CGTGAACGTG
GCGGTCGAGA GCGCGGCGAG CATTTACCAG CGGGCCAAGG ATTCGGGCCT GACCGATGCG
CAGGCGCTCA AGCTGTCGAA AGACACGCCG CTGCCGTACA ACGGCCCCGG GGTCAAGGTC
GCTTCGTCCC TGGATGACGG CTCGAACTGG AGCACCAAGC TGCAAAAGGA GATCGACCGG
CTCGCGCTGA TCAACGCGGC CAATTCCACC AGCACCGCCC AGACCAAGAC CTACCGGGTC
GAGTGGATCG TTAACGGCCA GGCCACAGAT TTCGAGATGG CCAGCGACGC CGACGCGCAA
AAGCTCATCG CCGCCCTGAA AAACGCCCAG CTCAGCGCCA GCTGA
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| Protein sequence | MPANPIHPVR EPSNVAFKPI EILINAKDNA SSVFDSLRAK VATVGLAILS YFGVQAFAGV
VKGAGDFEEA MSRVKSATGA STTEMQALRK AAEDAGANTK FTGTEAAGAL ENLAKAGLSA
KDAIAALPAV LELAQAGDIG LGEASEFVTK AVMGLGLAFT DAGRVANVLA LGANATNTSV
TGLAQALSYA APVAQSLGLS LESTVAIIGK FADAGIDASR AGTALNSILS QFGDPASKFR
QELAASGITT NKFEDALHQL AKAGPSGAKA INAVGTEAGP ALRALLNQGM PALDALTAKL
KNAEGAAAAA AKVMQDNLNG SLNGLSSAWD TLKIALGTPV LPVLKDGVDQ LAGALKAAVS
DGTVARFGEA IATAFQNGIK WVREFAAQVD FKQVTADLRA FADRTGEIFT QVGQYASTAG
NTVQLAYGVM SAGTNTVLGS IYALGSGFAT IAAGIQSGLA ALYEASSKVT FGAVSQQYKA
IAAEIRESSN ATAAAAQALS DKSRAAFLDV ADGAGLARDG FTGLASAATG AKPAITAAAV
AVDDMGAKLE ATRQKSQTAQ KATEDKKTAD EAATTALRQL RDEYAALVAN GDLQAAAEKI
KDINKALQAT PAAAKDSAKA AQDAAKLTAE AFEALGISSQ ASLKLVAGSA KVYYDRIKAD
GTSTAVDIAN AFKAYAEKAI AANNGVATEA IKTEAAMRGL EVQTDSAGKS IVKAMGEGQA
AAAKLGEQFR MTAEQVKANE DAMDRLNMKY TLSANYTERQ LSLLEKENAL VERRNALERE
RLNIDKEGYS LNTAGQRVNV AVESAASIYQ RAKDSGLTDA QALKLSKDTP LPYNGPGVKV
ASSLDDGSNW STKLQKEIDR LALINAANST STAQTKTYRV EWIVNGQATD FEMASDADAQ
KLIAALKNAQ LSAS
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