| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1298 |
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| Symbol | |
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| ID | 7173201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1587062 |
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| End bp | 1589407 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539805 |
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| Product | phage tail tape measure protein, TP901 family |
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| Protein accession | YP_002435715 |
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| Protein GI | 218886394 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0000000000950685 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGTGT TCAGCGTTTT CGCCACCATG TCCTTGCAGG ACATGATCTC CGGCCCGCTC
GGCTTCATCA CCGGCAGGAT GAAGCAGCTT GCGCAGGCTG CCGACGGCCT TGGCGGGCGC
ATGGGCAAGC TGGCCATTTC TATGGCTCCT GTTGCCGTGG CCGCAGCCGT GCTGCTGGCC
ACTCTGGGCC TTGCCGCGCG CGAAGCCATT GCCTTCGAGA GTTCCATGGC CGACGTGGCC
AAGGTGGTGA ACTTCGAGAG CGCGGGCGAG CTGCAATCCA TGTCCGACAC CATTCTGGAC
ATGAGCACCC GCATTCCCAT GGCGGCGGAC GGGCTGGCGG CCATCGTGGC CGCCGCCGCG
CAAAGCGGCG TGGCCAAGGC CGACCTGACG GAGTTTGCCG AACAGGCCGC CAAGATGGGC
GTGGCCTTCG ACCTGACCGG GGACCAGGCG GGCAAGATGA TGGCCGACTG GCGGGCGGGC
ATGAATTTGT CGCTGCCGCG TGTCTACGCT TTGGCGGACA GCGTGAACCA CCTTTCCAAC
AACATGAACG CCACCGCCCC GGCGCTGGGC GAGGTGATCC AGCGCGTGGG CGCGGTGGGC
ATGGCGTCGG GCCTTGCGGA AACGCAGGTG GCGGCGCTGG GCGCGGCGTT CCTTTCCGCC
GGTGCCTCGC CCGAAATCGC GTCCACGGCG CTCAAGAAGT TCACGTCCAC GCTGGTCAAA
GGCACGGCGT TGAGCAAGGA CGCGCAGGTG GCCTTCGGCT CGCTGGGCTT TTCGGTCACG
CAGATGGCCA AAGACATGCA AACCGACGCG CAGGGCACGA TCTTCAAGGT GTTGCAGGCG
CTGGCCGACA AGCCCAAAGA ATTGCAGATG TCGCTGCTCA CTGAGATGTT CGGTGAAGAA
GCGCTGGGGG CCATTGCCCC GCTGCTGGCC AACATGGGCA ACCTGACGCA GGCGTTCGAG
CTGGTGGGTG ATGCCTCGGC CTATGCGGGC AGCATGCAGG CGGAATTCGA CACCCGCAGC
AAGACCACGG CCAACACACT GATCCTGCTG GGCAACAAGA TGAAGGCGCT GATGATCGTG
GCGGGCAGTT ACTTTCTGCC GGTCATCGGG CGGGTTGCCG AAGGCATGGG CGGCTTCGTG
GACATGCTGC GCGGCGCGGC GCAGACCGTG GCCGGGGAAT TCGCGCTCAA GCTGTTGGCG
GGCATCGCCA CCGCCGTGGT GGCCGCCACG GCGCTGTCAG GGGCAATCTG GCTGCTGTCC
GCCGCCGGTC CCATGCTGGC CAAGGCCCTT GGGCCGCTCA AGGCGGCGCT GCTGGGCCTG
TCGTGGCCCA TGTGGGCGCT CATCGCCGTG GGCGCGGCAC TGTACGTGGC CTACCGCACC
AACTTCGGCG GCATGGCCGA CACCATCGAC CGCTGGTGGT CACGCATCTC GCTGGTGTTC
CGGGGCGTGG CCGCCGTGTT CGCCACGCTT ACCGACGGCG TGGGCGAGAT TCGCGGCCAG
CTGGCCACGG ACATCCGCGC CGCCGGGTTG GAAAGTCTGG TGGCCGCCGT GGCCCGCGTG
GTGTTCCGCA TCCGCGAATT CTTTACCGGC ATGGTTGATG CCGTGGCTCC TGTGGGCCAA
CGCTTGGCGG ATATCCTTGG GCCTTCGTTT TCGGCCATTG CCGCCACGCT GGGGCAGGTT
TTCGACGCGC TGGGCAGAAT GACCGCCGCC CTGTTCGGGG CCGGTGCCGC CACCGATGCG
TCCGGCTGGC AGCGCTTCGG CGAGGTGCTG GGCACCTTCG TGGCCGGTGC GGCCGAAGGG
GTGGCCATCG CCGTGCGTGC CCTGGTCGCG CCCATACAGA TTGCGGCGGG CGTGGTGCAG
TTCTTCCTCG ACCTCATCAA CGGGGTCAGC CTGTTCGACG CCGGGGCGGC ATTTCTCAAC
ACATTCACGG ACGGCATCAA GTCCGTGCTG GCCGTGCCCA TGGAAGCCGT GCGCGGCGCG
ATGAACCTGA TTTCCAAGCT GTTGCCGCAT TCGGATGCCG ACGCGGGGCC GCTGTCCACG
CTGACCGCAT CCGGCCGGGC CACCCTGACC ACCATGGGCG AGGGCATGCA GGCCGCCGCA
CCGGACCTTA ACGCCGCACT GGATGACGCC CTGGGCGCGG CGGTGCCCCC CGGCACGCTG
GAAGCCATGG CCGAGGTGGG CGTGACGCCC GCAAAGGGCC GCGAGGGCCG CACCGGCGGG
CGCGGGGTGA CCATCCACAT CGGCAGCGTG AGCCTGCCGG GCGTGTCCGA CGCGCAGGGC
TTCGTGTCCG AGTTGCAGGC CCTTGTGGCC GAGTACGACG GCGTTCCGGA AGGGGGCATG
GCATGA
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| Protein sequence | MEVFSVFATM SLQDMISGPL GFITGRMKQL AQAADGLGGR MGKLAISMAP VAVAAAVLLA
TLGLAAREAI AFESSMADVA KVVNFESAGE LQSMSDTILD MSTRIPMAAD GLAAIVAAAA
QSGVAKADLT EFAEQAAKMG VAFDLTGDQA GKMMADWRAG MNLSLPRVYA LADSVNHLSN
NMNATAPALG EVIQRVGAVG MASGLAETQV AALGAAFLSA GASPEIASTA LKKFTSTLVK
GTALSKDAQV AFGSLGFSVT QMAKDMQTDA QGTIFKVLQA LADKPKELQM SLLTEMFGEE
ALGAIAPLLA NMGNLTQAFE LVGDASAYAG SMQAEFDTRS KTTANTLILL GNKMKALMIV
AGSYFLPVIG RVAEGMGGFV DMLRGAAQTV AGEFALKLLA GIATAVVAAT ALSGAIWLLS
AAGPMLAKAL GPLKAALLGL SWPMWALIAV GAALYVAYRT NFGGMADTID RWWSRISLVF
RGVAAVFATL TDGVGEIRGQ LATDIRAAGL ESLVAAVARV VFRIREFFTG MVDAVAPVGQ
RLADILGPSF SAIAATLGQV FDALGRMTAA LFGAGAATDA SGWQRFGEVL GTFVAGAAEG
VAIAVRALVA PIQIAAGVVQ FFLDLINGVS LFDAGAAFLN TFTDGIKSVL AVPMEAVRGA
MNLISKLLPH SDADAGPLST LTASGRATLT TMGEGMQAAA PDLNAALDDA LGAAVPPGTL
EAMAEVGVTP AKGREGRTGG RGVTIHIGSV SLPGVSDAQG FVSELQALVA EYDGVPEGGM
A
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