| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2622 |
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| Symbol | |
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| ID | 5748192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2887642 |
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| End bp | 2890479 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297711 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_001563645 |
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| Protein GI | 160898063 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.14845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000014123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGTTG ACACCCTGCG CCTGGACGAG GTGCTCAAGC AGGCCGAGCG CGTGCACCAG
CCCCTGGCGC TGCTGGGCAG AACCAGCAGC AACACGGCCA GGGAACTCAA GGAAACGGTC
GACCAGTTGA AGAAGCTGCA GCAGCAGCAA ACCCAGCTGG GCGACTACCG CGCGCTGCGC
AGCGGCCTGG CAGACACCAC GGCACGGCTG CGCGGCGCGC GCCAGCAGAT GGCCCAGCTG
CGGCTGGAAT CGGGCGCGGG CGAGCAGCCC TCGCGCGCCA TGCTGCGCGC GCTGCGTTCG
GCCCAGGTCG AGGAAGAGCG CCTGGCGCTG CTGCGCGCCA CGCAGCGATC GCGCCTGATG
GACATGCGCG AAGGCCTGCG CGGCGCGGGC GTGGACACGG GCAACCTGTC GGCGCACGAG
CGCAAGCTGC ACAACGACAT CCGCGCCACC ACGGCCCAGA TGGAAAAGCA GCGCAAGGTG
GTGGCACCGG CCGCCCAGCG GCTGGAGAGA ATCGACGCCC TGCGCGAGCA GAGCAAGACC
CTGGCCGATC GCGGCCAAGC GCTGCGCGAG ACGGGCGGCA AGATGCTGGC GCCCGTGCGC
GCCGTGAGCC AGGCCTTCAT GACCGACGAC CAGGCCGCCG CGCAGCTGCG CGCCACCATG
GCGGGCAGCA ACGGCAAGCC GGGCGCCGAT TACCAGCAGG TGCTGGACTT GGCCAAGAGC
CTGGGCACCG ACATGCCCGG CAGCACGGCC GACTACATCG CGATGATGAA CCAGCTGCAG
CGCCAGGGTG TGTCCTCGCA GGATGTGCTG GGCGGCGTGG CACAGCAGGC GGCCAACCTG
GGCGCGGTGC TGAACATGCC CGCCAAGGAG GCCGGCGAGT TCGCGGCGCA GCTGCAGCAG
GCCACCCGCG CAAGCGCGGG CGACATGGCC GCACTGGCCG ACACGGTGCA GCGCACCTCC
CACCTGGGAC TGGACCCGAC AGGCATGGTC AAGGGCCTGG ATGCCATCGG CAAGGCCCTG
CCGCAGCTGG GGCAGCAGGG CGCAAGGTCG GGACAGATGT TCGCGCCGCT GCTGCTCATG
CTCAACGACG CCAGCATCAG CGGCGAGGCC GCGGGCAAGG CCGTCGGCAA CCTGGTCAAG
AACTCCATGG ACCCGGCCAA ACTAGGCCAG GTCAACAAGA TGCTCGCGGG CCAGGGCGTG
TCGCTGGACT TCAAGGACGC CAGCGGCCAG TTCGGCGGCA CCGAGCAGAT GATGGCCCAG
CTGCAAAAGC TGCAGAGCCT GGGCAGCGAC AAGCTGCGCG CCGCTGCGCT GGACAAGCTG
GCCGGCGGCG ATGCGCAGAC GCGCAAGGCC TTGGAGGCGC TGCTCCAGCA GGGCCCGGGC
GGCTACCAGC AGATCGCCTC CCAGCTCAAG TCACAGGCGG ATCTGGATGG GCGCGTGGCC
ATCCTGAAGG ACTCGGTCTC GGCCCAATAC GAGTCCGTCA AGGACAGCTA CAACGGCCTG
TTGAGCGACA TGGGCTCGAC CATCGAGTCC GACCTCAAGG CCGTGCTGGG CACGCTGCGC
GAGATGACCG AAGGCATGCG TGCCTGGGTC AAGGAGCATC CCCAGATCGT GCAGTGGACG
CTGCGCATCG TGGCCGTGCT GGGCCTGCTG GTCGCAGGCG TCGGCGTGGT GAGCAGCGTG
CTGTTCGGCC TGCTGGCGCC GCTGCTGCTC ACGCGCACCG TGTTCGGCCT GCTGGGTGCG
GCCATGGGCG CAGGCAGCGG TGCCTTGGGT GTGCTCAGGC GCGGCCTGGC GGCCGTGGTC
CTGTCGCTTG GCATGATGAG CGGTGGCGGC AGTGCCATGG GCCTGTTGGC CGGCGGCATG
CGCATGGCCA GCAACGCCGT GGGCGTGCTC CGGCGCGGCG TGGGCGCCGT GGTCCTGTCC
CTGTCCATGA TGAGCGGCGG TGGCGGAGCC ATGGGTCTGC TGTCGGGAGG CTTGCGCATG
GCCAGCAACG CTGCGGGCGT GCTCAGGCGC GGGCTGGGCG CTGTGGTCCT GTCGCTGGCC
ATGATGGGCC GCGGCGCTGC CATGGGCAGC ATAGGCACCG CACTGGCCGG CGCGGGCCGC
GCTGCAGGCC GCATCTTCGG CGGCGGTGCA GGCGCAGTTA CAGGTGCAGG CAAGGGCCGA
GCGGGCGCCG TCATGGGCCT GCTGGGCGCC GGCCTGGGTG CCGTCGGCGG TGGCCTGGGC
GGCAGTCTGG GTGGCGCAGC CGCATCGCTG ATGGGCCTGG TGCGCATGAC ACCCATGGGC
CGGCTCGCAG GCGGCCTGAT GGGCGCGGGC GGCTCGATCA TGCAGAACTG GGACGGCCTG
TCCACCGCCT TCAAGGCCGG CGACTGGAAG GGCGTCGGCG GCACGCTGCT GGAGGCCGGC
AAGGCCGGTC TGGATGGCGC TACGGGCGGG TTGTTCGGCG TGGTCTCTGA CCTGGCGGGC
AAGGGCATCA GCGGCCTGGC CTCGTCGGTG GGCTCGTGGT TCAAATCCGG CGATGCGTCA
GCACCCGACC AGGGCCGCGC CGGCGCACTG CGCCAGGGTG TTGCGGCCGC AGCCACGGCG
GCCACGCTGG CCACGGGCGC CATGCCGGCC CTGGCCGACA CGGGCGCCGT GCGCATCGAC
AGCCGCCCGC CGCTGGCCAG CGCCGCTGCA CCCGCGCCGG CACCGGCCCC GGTGGCCGGC
GCCACCATCC ACATAACCGT CAACGCCGCG CCCGGCCAGG ACGCGCAGGC CATTGCCCGC
GCCGTGGCCG CCGAGCTGGA CCGCCGCGAC ATGGCCAAGC GCTCCAGCGT GCTGTCGCAG
CTGTCGGACA TCGACTGA
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| Protein sequence | MAVDTLRLDE VLKQAERVHQ PLALLGRTSS NTARELKETV DQLKKLQQQQ TQLGDYRALR
SGLADTTARL RGARQQMAQL RLESGAGEQP SRAMLRALRS AQVEEERLAL LRATQRSRLM
DMREGLRGAG VDTGNLSAHE RKLHNDIRAT TAQMEKQRKV VAPAAQRLER IDALREQSKT
LADRGQALRE TGGKMLAPVR AVSQAFMTDD QAAAQLRATM AGSNGKPGAD YQQVLDLAKS
LGTDMPGSTA DYIAMMNQLQ RQGVSSQDVL GGVAQQAANL GAVLNMPAKE AGEFAAQLQQ
ATRASAGDMA ALADTVQRTS HLGLDPTGMV KGLDAIGKAL PQLGQQGARS GQMFAPLLLM
LNDASISGEA AGKAVGNLVK NSMDPAKLGQ VNKMLAGQGV SLDFKDASGQ FGGTEQMMAQ
LQKLQSLGSD KLRAAALDKL AGGDAQTRKA LEALLQQGPG GYQQIASQLK SQADLDGRVA
ILKDSVSAQY ESVKDSYNGL LSDMGSTIES DLKAVLGTLR EMTEGMRAWV KEHPQIVQWT
LRIVAVLGLL VAGVGVVSSV LFGLLAPLLL TRTVFGLLGA AMGAGSGALG VLRRGLAAVV
LSLGMMSGGG SAMGLLAGGM RMASNAVGVL RRGVGAVVLS LSMMSGGGGA MGLLSGGLRM
ASNAAGVLRR GLGAVVLSLA MMGRGAAMGS IGTALAGAGR AAGRIFGGGA GAVTGAGKGR
AGAVMGLLGA GLGAVGGGLG GSLGGAAASL MGLVRMTPMG RLAGGLMGAG GSIMQNWDGL
STAFKAGDWK GVGGTLLEAG KAGLDGATGG LFGVVSDLAG KGISGLASSV GSWFKSGDAS
APDQGRAGAL RQGVAAAATA ATLATGAMPA LADTGAVRID SRPPLASAAA PAPAPAPVAG
ATIHITVNAA PGQDAQAIAR AVAAELDRRD MAKRSSVLSQ LSDID
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