| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0709 |
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| Symbol | |
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| ID | 4173441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 802724 |
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| End bp | 804853 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053711 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_660291 |
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| Protein GI | 109897036 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG CGGCAAAAGT AGAAAAGTTA ATGTTTACCG TCGGCCTGAC TGATAAAACA
GCCGCGCCCA TTGGTGCCAT TGATGCCCGC ATAGACAAAC TGGCCAACAA TGCCCAAAAA
GGCTTTCGCA ATATAGGCTA CGGTGCCGCA GGCATAGCCG GTGCAGTAGT ACTGTTAAAC
CGCGCCATGG CACCCGCTAT TGATCAACAA CGCGCCTTAA ATGAAGTGGC CAGCCTAGAC
GTAGAGCCAA AAGCACTAAA ACAACTCAAC GCCATGGCCT TGCAAACCCA AGCACAATTT
GGCATTGCCA GCAGCGAAAT AATCCGCAGC GCTTACGACA TTCAAAGTGG TATTAGCGGC
CTAAATGGCA ATGAGCTAAG CAAGTTCACC AAAAACAGCG CCATACTAGC CAAAGGCACC
AAGTCAGACG CCGCCACAAT CACCAATTAC ATGGGCACCA TGTACGGCAT ATTTAAAGAA
AACGCAGTTC AAATGGGCAA AAGCCAATGG GTTGATCAGC TCGCCGGGCA AACTGCCACC
GCCGTACAAA TATTTAAAAC CACGGGTTCG CAAATGAGCA GTGCCTTTGA ATCATTAGGG
GCCGCGGGGC AATCAGCACT TGTGCCCATG CATGAGCAAA TGGCTGTGCT AGGGCTATTA
CAAGCCACTA TGAGTGGCAG CGAAGCGGGC ACAAAATACG AATCGTTCTT ACAAAATATT
GGTCGAGCAC AAGACAAGCT AGGGCTGAAA TTTACCAATA GCCAAGGTCG CATGCTGCCC
ATTGTCGATA TCATGCAAAA AATACAAGGC AAATTTGGTG AGATAAACAC CGTTGCCAAA
TCAGATATTA TTCAACAAGC GTTCGGCAGT GATGAAGCTG TGGCCCTTGT GAAATTATTA
GTGGCCGATA CTGCCAGTTT GGCGAAAGGG ATTGATACGC TAGGCGATGT AAGTGGGATG
GAAAAACCCA TTAAAATGGC TAAAACCATG ACAGACTCAT GGCAACAACT CACCGGCATT
GTGAACAGCG TACATACCGC CTTTAGCATG GCATTAATGC CCGTGCTGCA GCCCGTAATC
GACAAAATGA CCGAGGGCGG CAGCACATTA CTACGCTGGA CCAACATGTT TCCGCATTTA
ACCAGTGCCG TGGCCACCGT GGGCATGGCC GTAGTGGGGT TAATTGCCAC TATTGCAGCA
TTAACCGTGG CCGTGGGTAT TTACCGATTT ATGGCCGTAG GCTGGGCAGT TATTCATACT
GTTTTAACCG GTGGCATGTG GCTATTAAGC GCAGTCGTTG GTGTAGTTTC AATCGCGTAC
AAATTCGCCC GCGCCAGCAT GTTAGGGTTT TATTTGTTAA GTGTGACCAG TGGCGGGGCA
CTAGCTGCCT TACGCGTGAT CATGCTTAGT TTAACCACAG GCGTGTGGGC GTTTACCGCC
GCGTTACTTG CTAACCCAAT TACTTGGTTG GTAGTAGGTG TTGTCGCGTT AGGTGCGGCA
TTGGTTGCAG CAGTGGTGTA CTGGGATGAC ATAAAAAAAG CCGCTGGGGT GGCAATTGAA
TGGATAAGCG CAAAGCTAAC CGCATTTACT GATTTTATTG GCAACTTGAA CCCAATGGAA
ATGCTAGGCA GTAGCATTGA TTGGCTCATT GACAAAATAA ACCTGATCCC CGGCGTTGAT
ATAGAAACCC GTTTCAGTGA ACCCGCAAAA ACGCCAAGCG CCAACAACAA CCAGGTGCAA
ACATTAGCAA GTGCACCCTT GGCCACAGCC GCAAACCAAA GTGGTTACCG CGCTTACAAC
AATGTTTTGC CTCTTAATAT TGATAGAAAT GCCAACGCCC GCAGCCCATT GCGAGCACAG
CAAAACATAC CTGCGCAAAA CAATATTGTG CCATTGCACT TACAGCGCCA AATAAACACC
AGCGAACCTA AGCGCGAGCA GTTAACCACC ACGAACAGCA TTACCCAAAA CCGCTATGAC
ATACCCAAAG GCGGGGCGCT TAGCCAAATT AAGCAAATGA ACAGCGAAAC CAACAACAAC
GGCGTCAGCA TGGGCAACGT AACGATAAAA ACAGAGCAAA TAAACGATGC TGAAGACTTG
CAACAACAAC TACTACTGGC AGCCATGTAA
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| Protein sequence | MSFAAKVEKL MFTVGLTDKT AAPIGAIDAR IDKLANNAQK GFRNIGYGAA GIAGAVVLLN
RAMAPAIDQQ RALNEVASLD VEPKALKQLN AMALQTQAQF GIASSEIIRS AYDIQSGISG
LNGNELSKFT KNSAILAKGT KSDAATITNY MGTMYGIFKE NAVQMGKSQW VDQLAGQTAT
AVQIFKTTGS QMSSAFESLG AAGQSALVPM HEQMAVLGLL QATMSGSEAG TKYESFLQNI
GRAQDKLGLK FTNSQGRMLP IVDIMQKIQG KFGEINTVAK SDIIQQAFGS DEAVALVKLL
VADTASLAKG IDTLGDVSGM EKPIKMAKTM TDSWQQLTGI VNSVHTAFSM ALMPVLQPVI
DKMTEGGSTL LRWTNMFPHL TSAVATVGMA VVGLIATIAA LTVAVGIYRF MAVGWAVIHT
VLTGGMWLLS AVVGVVSIAY KFARASMLGF YLLSVTSGGA LAALRVIMLS LTTGVWAFTA
ALLANPITWL VVGVVALGAA LVAAVVYWDD IKKAAGVAIE WISAKLTAFT DFIGNLNPME
MLGSSIDWLI DKINLIPGVD IETRFSEPAK TPSANNNQVQ TLASAPLATA ANQSGYRAYN
NVLPLNIDRN ANARSPLRAQ QNIPAQNNIV PLHLQRQINT SEPKREQLTT TNSITQNRYD
IPKGGALSQI KQMNSETNNN GVSMGNVTIK TEQINDAEDL QQQLLLAAM
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