More than 300 homologs were found in PanDaTox collection
for query gene Cphy_2731 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_2731  binding-protein-dependent transport systems inner membrane component  100 
 
 
283 aa  568  1e-161  Clostridium phytofermentans ISDg  Bacteria  normal  0.528009  n/a   
 
 
-
 
NC_013172  Bfae_29180  carbohydrate ABC transporter membrane protein  39.86 
 
 
320 aa  218  8.999999999999998e-56  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0930  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
294 aa  196  4.0000000000000005e-49  Clostridium phytofermentans ISDg  Bacteria  normal  0.369342  n/a   
 
 
-
 
NC_010001  Cphy_0665  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
295 aa  185  8e-46  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000000136095  n/a   
 
 
-
 
NC_013131  Caci_3820  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
306 aa  184  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.475945  normal  0.210962 
 
 
-
 
NC_013131  Caci_0129  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
299 aa  181  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1767  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
335 aa  179  4e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0172593  normal  0.0301205 
 
 
-
 
NC_013530  Xcel_2661  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
307 aa  177  2e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2332  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
294 aa  177  2e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2400  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
313 aa  177  2e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0225892  normal 
 
 
-
 
NC_013521  Sked_33160  carbohydrate ABC transporter membrane protein  32.75 
 
 
312 aa  177  2e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.410884  normal  0.713959 
 
 
-
 
NC_014165  Tbis_1562  binding-protein-dependent transporter inner membrane component  34.26 
 
 
290 aa  176  3e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.0590274  normal  0.820789 
 
 
-
 
NC_013521  Sked_20500  carbohydrate ABC transporter membrane protein  33.68 
 
 
306 aa  176  3e-43  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00619116  normal  0.339841 
 
 
-
 
NC_012034  Athe_2030  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
297 aa  176  5e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0144  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
290 aa  175  8e-43  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_13610  carbohydrate ABC transporter membrane protein  35.61 
 
 
329 aa  175  8e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.230685  n/a   
 
 
-
 
NC_012669  Bcav_3324  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
307 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.392519  normal  0.062239 
 
 
-
 
NC_013411  GYMC61_2707  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
296 aa  173  1.9999999999999998e-42  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_2804  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
311 aa  173  1.9999999999999998e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.257697  hitchhiker  0.00295081 
 
 
-
 
NC_013172  Bfae_01650  carbohydrate ABC transporter membrane protein  33.56 
 
 
308 aa  174  1.9999999999999998e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3314  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
290 aa  170  2e-41  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1439  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
296 aa  169  6e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.890968  normal 
 
 
-
 
NC_011886  Achl_3112  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
290 aa  167  1e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008527  LACR_1581  ABC-type sugar transport system, permease component  36.4 
 
 
287 aa  167  2e-40  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0394  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
303 aa  166  2.9999999999999998e-40  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_17880  carbohydrate ABC transporter membrane protein  33.94 
 
 
315 aa  165  5.9999999999999996e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  0.223186  n/a   
 
 
-
 
NC_010001  Cphy_0774  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
281 aa  165  5.9999999999999996e-40  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00144741  n/a   
 
 
-
 
NC_014151  Cfla_2999  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
309 aa  165  6.9999999999999995e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1015  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
296 aa  165  8e-40  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0762  ABC-type sugar transport system, permease component  37.22 
 
 
300 aa  165  1.0000000000000001e-39  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0168345  n/a   
 
 
-
 
NC_012669  Bcav_1580  binding-protein-dependent transport systems inner membrane component  37.19 
 
 
300 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0411  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
315 aa  164  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0664825 
 
 
-
 
NC_010001  Cphy_1120  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
289 aa  164  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  normal  0.258106  n/a   
 
 
-
 
NC_013946  Mrub_0280  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
289 aa  163  3e-39  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.912812 
 
 
-
 
NC_012669  Bcav_1873  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
287 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal  0.121755 
 
 
-
 
NC_012669  Bcav_1321  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
322 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1710  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
300 aa  163  3e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1917  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
305 aa  162  6e-39  Clostridium phytofermentans ISDg  Bacteria  normal  0.0958924  n/a   
 
 
-
 
NC_012669  Bcav_4042  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
311 aa  162  9e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1102  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
293 aa  161  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_05730  carbohydrate ABC transporter membrane protein  37.13 
 
 
313 aa  159  3e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.709273  normal 
 
 
-
 
NC_013093  Amir_1980  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
313 aa  160  3e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0427  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
320 aa  159  5e-38  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0145  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
307 aa  159  5e-38  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0861  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
302 aa  159  5e-38  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0086  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
294 aa  159  7e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.117881  n/a   
 
 
-
 
NC_010001  Cphy_0486  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
297 aa  157  1e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0368  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
309 aa  157  2e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1189  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
314 aa  155  5.0000000000000005e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.635742  n/a   
 
 
-
 
NC_013172  Bfae_04180  carbohydrate ABC transporter membrane protein  35.82 
 
 
327 aa  155  9e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2338  ABC transporter, permease protein  32.52 
 
 
318 aa  154  2e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2191  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
301 aa  154  2e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0851  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
299 aa  153  2.9999999999999998e-36  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1254  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
294 aa  153  2.9999999999999998e-36  Clostridium cellulolyticum H10  Bacteria  normal  0.576664  n/a   
 
 
-
 
NC_008262  CPR_2050  sugar transport system (permease) (binding protein dependent transporter)  32.17 
 
 
318 aa  153  4e-36  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2655  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
306 aa  152  5e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_10100  carbohydrate ABC transporter membrane protein  33.96 
 
 
285 aa  152  8.999999999999999e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.849454 
 
 
-
 
NC_011898  Ccel_0947  binding-protein-dependent transport systems inner membrane component  28.47 
 
 
298 aa  150  3e-35  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000904661  n/a   
 
 
-
 
NC_011661  Dtur_0311  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
296 aa  148  1.0000000000000001e-34  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2552  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
300 aa  147  2.0000000000000003e-34  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2053  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
296 aa  145  6e-34  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3387  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
317 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1291  hypothetical protein  32.98 
 
 
299 aa  145  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.60035 
 
 
-
 
NC_012669  Bcav_0060  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
318 aa  143  4e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.451347  normal  0.228121 
 
 
-
 
NC_010001  Cphy_1716  binding-protein-dependent transport systems inner membrane component  30.55 
 
 
310 aa  142  4e-33  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0152  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
304 aa  142  6e-33  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6723  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
284 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.340463  normal 
 
 
-
 
NC_013131  Caci_4680  binding-protein-dependent transport systems inner membrane component  28.76 
 
 
317 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00968788  normal 
 
 
-
 
NC_012034  Athe_2092  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
292 aa  140  1.9999999999999998e-32  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000117143  n/a   
 
 
-
 
NC_014211  Ndas_5563  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
304 aa  140  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.451353 
 
 
-
 
NC_010001  Cphy_1548  binding-protein-dependent transport systems inner membrane component  30.59 
 
 
330 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  normal  0.0364153  n/a   
 
 
-
 
NC_010001  Cphy_3208  binding-protein-dependent transport systems inner membrane component  29.19 
 
 
301 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2786  binding-protein-dependent transport systems inner membrane component  29.76 
 
 
320 aa  139  4.999999999999999e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02850  carbohydrate ABC transporter membrane protein  31.46 
 
 
302 aa  139  7.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0696  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
303 aa  137  2e-31  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000104269  n/a   
 
 
-
 
NC_013515  Smon_0122  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
292 aa  136  5e-31  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0596  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
301 aa  135  8e-31  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1611  putative transport system integral membrane protein  32.28 
 
 
303 aa  133  3.9999999999999996e-30  Thermobifida fusca YX  Bacteria  normal  0.875629  n/a   
 
 
-
 
NC_010001  Cphy_0340  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
302 aa  132  3.9999999999999996e-30  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3568  binding-protein-dependent transport systems inner membrane component  29.02 
 
 
408 aa  132  7.999999999999999e-30  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2570  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
311 aa  129  6e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5754  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
293 aa  127  2.0000000000000002e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.460606  normal 
 
 
-
 
NC_010001  Cphy_3241  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
300 aa  127  2.0000000000000002e-28  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0255  ABC-type maltose transport system, permease component  31.62 
 
 
276 aa  127  3e-28  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2172  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
321 aa  125  8.000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.499176  n/a   
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
295 aa  124  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_011898  Ccel_2457  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
307 aa  122  8e-27  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_1991  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
286 aa  120  3e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4081  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
275 aa  119  3.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3568  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
315 aa  118  9.999999999999999e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_2918  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
290 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.787566  n/a   
 
 
-
 
NC_010003  Pmob_0525  binding-protein-dependent transport systems inner membrane component  28.99 
 
 
282 aa  116  3.9999999999999997e-25  Petrotoga mobilis SJ95  Bacteria  normal  0.641488  n/a   
 
 
-
 
NC_013411  GYMC61_1729  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
275 aa  116  5e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_4936  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
326 aa  115  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00903447  normal 
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  27.84 
 
 
273 aa  113  4.0000000000000004e-24  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0528  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
281 aa  112  6e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00417189  n/a   
 
 
-
 
NC_013739  Cwoe_3955  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
274 aa  111  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2199  monosaccharide-transporting ATPase  31.9 
 
 
269 aa  110  3e-23  Thermoanaerobacter sp. X514  Bacteria  normal  0.139368  n/a   
 
 
-
 
NC_011981  Avi_7346  ABC transporter membrane spanning protein (sugar)  34.15 
 
 
278 aa  109  6e-23  Agrobacterium vitis S4  Bacteria  normal  0.477248  n/a   
 
 
-
 
NC_009718  Fnod_0396  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
722 aa  109  6e-23  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0626826  n/a   
 
 
-
 
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