Gene Athe_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2030 
Symbol 
ID7408243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2142691 
End bp2143584 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content33% 
IMG OID643716397 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002573880 
Protein GI222529998 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAG ATAATTCGCT ATCAACCAAA ATTTTGACGT TAATTGTCCA TATTACTATG 
ATATTTGTGT TAATCGTAAC TTTATATCCT GTGCTAAATG TGTTTGCTTC ATCTTTAGGT
AGTGCAGATG CAAACAACAG AGGAATAGTT ACTATTTTTC CAATTGGTTT TACGTTAGAT
TCATACAAGA TGATATTTAC AGCGGGGGCA GTACCTCGAG CATTTAAAAA CTCAGTTATT
TATACTGTTG TAGGGACTTT GATAAATCTT ATTTTGACTA CTTCATTTGC TTATCCACTA
TCAAGAAAAA GTTTGCCGCT GAAGTCCTTT TATACTTGGC TTGTTATCAT AACTATGTAT
TTTTCAGGTG GCTTAATTCC CCTTTTTATA TTAGTAAAAA ATTTAGGATT ATATGACACA
ATGTGGGCAT TGATATTGCC TGGAGCAATT AACACAACAA ACCTTATCAT AATGCGAACA
TTTTTCCAAA ATATTCCACA TGAATTAGAA GAGTCTGCTT ATCTTGATGG AGCAAATGAA
TTTATTATTT TTACAAGGAT AGTCTTACCA CTTTCAAAAG CAGCACTTGC AACTGTAGGT
CTTTATTATG CTGTGGGGCA TTGGAATTCT TGGTTTAATG CAATGATATT TTTAAGTGAC
CAAAAAAAAT TTCCTTTGCA GCTTGTTTTA AGAGATATTA TAATGCTTGC ACAGACACTT
CAGCAAGCAG CTGAAGCAGG TGATTTGAGT GCAAGGCAAG AGTTGGGTTT GATCAACGCA
AAGGGGGTGA AATATGCAAC ACTTTTTGTT TCAATGATTC CAATGTTGGC TGTTTATCCA
TTTGTACAGA AATATTTTGT TAAAGGTGTT ATGATAGGTT CATTAAAAGA TTAA
 
Protein sequence
MVKDNSLSTK ILTLIVHITM IFVLIVTLYP VLNVFASSLG SADANNRGIV TIFPIGFTLD 
SYKMIFTAGA VPRAFKNSVI YTVVGTLINL ILTTSFAYPL SRKSLPLKSF YTWLVIITMY
FSGGLIPLFI LVKNLGLYDT MWALILPGAI NTTNLIIMRT FFQNIPHELE ESAYLDGANE
FIIFTRIVLP LSKAALATVG LYYAVGHWNS WFNAMIFLSD QKKFPLQLVL RDIIMLAQTL
QQAAEAGDLS ARQELGLINA KGVKYATLFV SMIPMLAVYP FVQKYFVKGV MIGSLKD