| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4680 |
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| Symbol | |
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| ID | 8336034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5330141 |
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| End bp | 5331094 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644957780 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115382 |
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| Protein GI | 256393818 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00968788 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAT TAACGCAGTC GCCCCCCTCG CGCGCCGTCA CCACCGCCCC GCGCAAGCGA
GCCAAGGGCC GCGAGGTCTG GGAGGAGAGC CCGACCTGGT TCGGCCAGTT CGGCAAGGGC
ACGGTCCTGA CCGTCGTCTG CGCCCTGGTC ATCGTCCCGG TCTGGGCCGT GGTGATCACC
AGCTTCTCCA CCAAGAGCTC CATCAACGCC GCCGGCGGCC TGGTCCTGGT CCCCCACGGC
CTGAGCCTGC AGAACTACCA GCTCATCTTC AGCGGCGGCA CCGTCTCCCA GGCCCTCTAC
GTCAGCCTCT TCGTGACCCT GATCGGCACC GCCCTGTCAA TGCTGGTCAG CGTCCTGGCC
GCCTACGGCC TGTCCCGCCC CCGCTCCTTC GGCCAGCGCC CACTCCTGAT GATGCTGATC
GTCACCATGT TCTTCAACGG CGGCCTGATC CCGACGTTCC TGGTGGTCAG CGACCTGAAG
CTCTACGGCA GCATGTGGGC GATGATCCTC CCCTCCATGG TGAACGTCTT CAACATCCTC
ATCATCCGCT CCTTCTTCCA AAACACCGCC GCGGAGATGA TCGAAGCCGC CCGCCTCGAC
GGCGCCAACG AATGGCGCCT CCTCTGGTCA GTAGTCATCC CGACCTCGCG CCCCGTCCTC
GCCGTGATGA CGATGTTCTA CGCCGTGACC TACTGGGGCA CCTTCTTCAA CGCCCTGCTG
TACGAACCCG ACAGCCGCAA ATGGCCGCTG GCGATGGTGA TCTACGAGTA CACGTACTCA
GGCAACCAGA TGCCCGGCAT GGGCACCACA GGCATCGGCG GACTGCAGAA CGCCTCGCAG
CTCGGCTTGC AGATGTGCGT GGTGTCGCTG TCGCTGGTGC CGATCATCGT GCTGACGCCC
TTCGTGCAGA AGCACTTCTC GAAGGGGATG TTGACGGGGG CTATCAAGGG GTGA
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| Protein sequence | MSSLTQSPPS RAVTTAPRKR AKGREVWEES PTWFGQFGKG TVLTVVCALV IVPVWAVVIT
SFSTKSSINA AGGLVLVPHG LSLQNYQLIF SGGTVSQALY VSLFVTLIGT ALSMLVSVLA
AYGLSRPRSF GQRPLLMMLI VTMFFNGGLI PTFLVVSDLK LYGSMWAMIL PSMVNVFNIL
IIRSFFQNTA AEMIEAARLD GANEWRLLWS VVIPTSRPVL AVMTMFYAVT YWGTFFNALL
YEPDSRKWPL AMVIYEYTYS GNQMPGMGTT GIGGLQNASQ LGLQMCVVSL SLVPIIVLTP
FVQKHFSKGM LTGAIKG
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