| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20500 |
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| Symbol | |
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| ID | 8633685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 2284137 |
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| End bp | 2285057 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | carbohydrate ABC transporter membrane protein |
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| Protein accession | YP_003314806 |
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| Protein GI | 269795351 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00619116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.339841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCC CGACCGCCTC GCCGCGGGGC GGACGCCCGG TGGGCGTGCG TGACAGCCGT
GGCTACCGGA CGTTCACGTG GGTGAACGGC ACCCTCCTGC TCGTGGTGTG CGCGGTGATG
CTGTACCCCT TCGTCACGGT CGTGGCGCAG TCGTTCAGCG GTGCGGGTGC GATCAAGGCG
GGGATGGTCA ACGTCTGGCC GGTGGACTTC AACGTCGACA CCTACAAGGC CGTGGCGCAG
AACGACGTGT TCTGGCGCAA CTACCGCAAC ACCGTCCAGT ACACGGTGGT CGGTACGACC
ATCGCGATGG CGCTCACGAC CGTCTTCGCC TTCGTGCTGT CGAAGAAGCA CCTGCGGGGC
CGGACCTTCC TCATCTGGGT CGCGGTCTTC ACCATGTTCT TCAACGGTGG TCTGATCCCC
AACTACGTGC TCATCACGTC GCTCGGCATG AAGAACACCA TGTGGGCGCT CGTGCTGCCG
GGGGCGATCT CGGTGTTCAA CCTGCTGGTC ATGAAGTCCT TCTTCGAGAA CCTCCCCCGG
GAGCTCGAGG AGGCCGCGCA GATCGACGGG CTCGGGTGGT TCGGCATCTT CGGGCGCATC
GTGCTGCCGT TGTCCAAGGC GGTCCTCGCC ACGATGGTGC TGTTCTACTC GGTGGCGATC
TGGAACGACT GGTTCGCGGC GTTCCTCTAC CTGGACGACC AGGACCTGTT CCCGGTGACG
CTGTTCCTGC GCAACCTCGT CGCGGGGGCG TCGACGTCGG CGTCGGAGGG TGCTGCCCTG
GCGGGGACGA CGACGGCGGC GATCTCGGCG AACATCCAGG CGGTGACGAT GATCCTCACG
ATCATCCCGA TCCTGTGCAT CTACCCGTTC GTCCAGCGGT ACTTCGTGTC CGGCGTGATG
CTCGGGTCGG TCAAGGGATG A
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| Protein sequence | MTSPTASPRG GRPVGVRDSR GYRTFTWVNG TLLLVVCAVM LYPFVTVVAQ SFSGAGAIKA
GMVNVWPVDF NVDTYKAVAQ NDVFWRNYRN TVQYTVVGTT IAMALTTVFA FVLSKKHLRG
RTFLIWVAVF TMFFNGGLIP NYVLITSLGM KNTMWALVLP GAISVFNLLV MKSFFENLPR
ELEEAAQIDG LGWFGIFGRI VLPLSKAVLA TMVLFYSVAI WNDWFAAFLY LDDQDLFPVT
LFLRNLVAGA STSASEGAAL AGTTTAAISA NIQAVTMILT IIPILCIYPF VQRYFVSGVM
LGSVKG
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