| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33160 |
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| Symbol | |
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| ID | 8634949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3692045 |
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| End bp | 3692983 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | carbohydrate ABC transporter membrane protein |
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| Protein accession | YP_003316045 |
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| Protein GI | 269796590 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.410884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.713959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGACCA CGACCGCACG TGCGACCGGG GCGCCGCCCC GGGGACCTGT CCCACCACGC
CCCCGCCGCC TCAAGGACTC GCGCGGCTAC CGCGCCTTCC AGGTGATCAA CACCGTCGTC
CTGCTCGGCG TGGTCGTGGT GACCCTGTAC CCCTTCGTCA ACATCCTCGC CCAGTCCTTC
AGCGCCGACT CGGCGATCCG GTCCGGACAG GTGAACATCT GGCCCAAGGG CTTCAACCTC
ACCACGTACC AGCTCGTCAT GAGCGACTCG ATGTTCTGGA CCAACTACAA GAACACCGTC
GTCTACACGG TCGTGGCGAC GGCCATCGCG ATCGTGCTCA CCACCTGCTA CGCCTACGTC
CTGTCCAAGC GAGACCTGCG CGGCCGCGGG CTGCTCATCG GCATCGCCGT CTTCACGATG
TTCTTCAACG GCGGCCTCAT CCCCAACTAC GTCCTCATCA GCGGGATGGG CCTCAAGAAC
ACCCTGTGGG CGATCGTGCT GCCCAACGCC ATCTCGGTGT TCAACCTGCT CGTCATGAAG
TCGTTCTTCG AGAACATGCC CGAGGAGCTC GAGGAGGCTG CGCAGATCGA CGGGCTCAAC
ACCTACGGGA CGCTGCTGCG CATCGTGCTG CCGCTCTCCA AGGCGGTCCT GGCGACGATG
CTGCTGTTCT ACGCGGTGAG CTTCTGGAAC TCGTGGTTCG CGGCGTTCCT CTACATGGAC
CGGGCCGAGC TGTTCCCCGT GACCGTCTAC CTGCGCAACC TCATCGCCGG GGCTACCTCG
GCGAGCTCGA CCGGTGCGGG CGTCAGCGAC GTCGCCCAGG TCTCCGCGAA CATCCAGGCC
GTGACCATCA TCCTCACCGT CCTGCCCATC CTGTGCCTGT ACCCGATGAT CCAGAAGTAC
TTCGTGTCAG GCGTGATGCT CGGCTCCGTC AAGGGCTGA
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| Protein sequence | MVTTTARATG APPRGPVPPR PRRLKDSRGY RAFQVINTVV LLGVVVVTLY PFVNILAQSF
SADSAIRSGQ VNIWPKGFNL TTYQLVMSDS MFWTNYKNTV VYTVVATAIA IVLTTCYAYV
LSKRDLRGRG LLIGIAVFTM FFNGGLIPNY VLISGMGLKN TLWAIVLPNA ISVFNLLVMK
SFFENMPEEL EEAAQIDGLN TYGTLLRIVL PLSKAVLATM LLFYAVSFWN SWFAAFLYMD
RAELFPVTVY LRNLIAGATS ASSTGAGVSD VAQVSANIQA VTIILTVLPI LCLYPMIQKY
FVSGVMLGSV KG
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