| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1120 |
|---|
| Symbol | |
|---|
| ID | 5741955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1412857 |
|---|
| End bp | 1413726 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641292225 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001558237 |
|---|
| Protein GI | 160879269 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.258106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAT ATCGTACAAA AGGCAATATC ATATTCGACG CAATTATATA CATCATCATG
ATTTTTGTGC TCTTGGTATG CTTAGTGCCA TTTATCTATA TGCTTGCGGT ATCACTTTCT
GATCCAAAGG CAATCGTTAA CAATAAAGTT TCCCTTATCC CTATCGGGAT TAATTTTGAA
GCCTATAAGC AAATATTTAG ATATCCAAAT TTCTTTAGGG CTTATGGAAA TACAATCTTT
TACACAGGGG TTGGAACTTT AATATCCCTG ATTATGACTA CACTATTTGC ATACCCGTTA
TCAAAACCAA ATCTATGGGG TCAAAAAATA GCAATGAAAA TCGTTGTATT CTCCATGTTT
TTCTCTGGTG GATTGATTCC GAATTATTTA CTTATATCTA ATTTAGGGTT AACAGGAACA
AGATTTGCAA TGTTACTACC ATTCGCTATC AGCCAATTTA ATTTAATCAT ATTAATCAAT
TTCTTTAAAT CACTTCCGTC AGAAATCGAA GAAGCTGCAC TAATTGATGG TTTGAGTTAT
TTTGGGGTAT TAAGAAAAAT CATTGTTCCG CTTTCAAAAG CAGCATTGGC TACGGTTGGC
CTGTATACCG CAGTATTTTT CTGGAATGAC TGGTTTAATG GTTTAATTTA CTTAGATACA
AAACAGTACC CAGTTATGCT ATTTTTAAGA AACATTGTAA ATGGTACTAC AATGGTGGGA
GACGCTGCTG GTTCTGCGGA TAAAGCAACG ATTGCAATAT CCATTAAGTC AGCAGTAATT
ATAACCTCCA CATTACCAAT TATTATTTTA TATCCATTTT TACAGAAGTA TTTTGTGAAA
GGACTTACTG TTGGTTCCGT TAAGGGCTGA
|
|---|
| Protein sequence | MKKYRTKGNI IFDAIIYIIM IFVLLVCLVP FIYMLAVSLS DPKAIVNNKV SLIPIGINFE
AYKQIFRYPN FFRAYGNTIF YTGVGTLISL IMTTLFAYPL SKPNLWGQKI AMKIVVFSMF
FSGGLIPNYL LISNLGLTGT RFAMLLPFAI SQFNLIILIN FFKSLPSEIE EAALIDGLSY
FGVLRKIIVP LSKAALATVG LYTAVFFWND WFNGLIYLDT KQYPVMLFLR NIVNGTTMVG
DAAGSADKAT IAISIKSAVI ITSTLPIIIL YPFLQKYFVK GLTVGSVKG
|
|---|
| |