Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0762 |
Symbol | |
ID | 4434130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 706475 |
End bp | 707377 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639666531 |
Product | ABC-type sugar transport system, permease component |
Protein accession | YP_808742 |
Protein GI | 116511526 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0168345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA CACATAAATC GAGAAGGCCA AAAAGTTTAC AAGAAAAAAT ATTTGATGTT CTGGTATATG GCATGGCTGT TTTGCTTATT TTACTCATTA TTTATCCTCT TTGGTTCGTT ATTATCGCCT CTTTTTCTAA CCCACAGGAT GTGGCAACAG GCGCAGTTTG GTTTTGGCCG AAATCTTGGA GTTTAGAGGG CTATAAAACC CTATTTGCTC AGCCCTTAAT TTGGCGTTCA TATTTTAATA CTATTTTATA TACAGTTGCA GGGACAGCAT TTGGGTTATT GGTTAATATC CCTGTCGGTT ATGCCTTATC ACGAAGAGAT TTATTTGGAA GAAAATGGAT TTCGCTACTC TATGTTGTTC CTATGTTTGT GACAGGAGGA TTGATTCCAA TTTATTTGGT GACTAAAAAT TTTGGACTCT TGAATACGGT TTGGGTCATG ATTGTTCCCT TTGCGGTTTC CCCTTATAAT ATTATCGTTG CTCGGACCTT TTTTCAGGAG TCTATTCCAA ATGGTCTTTG GGAAGCTGCT CAAGTTGATG GCTCGAGTAC CTTTAGATAT TTTTTCCAAA TTGTTCTTCC TTTGTCAAAA GCGATTTTGG CAGTTATCGG TTTTTGGACA GCAGTCGGAA TTTGGAACTC ATGGTTCAAT GCTTTGATTT ATCTTACTGA CCAAAATCTG CAACCCTTGC AATTAATATT AAGACAATTA TTGATTACAA ACCAAACACT CCAAAGTCAA GCTACTGGTG ACGTAGCCTC ACAACTTCGT CAAACTGCTG ATATGATGAA ATATGCAGCT ATTGTTGTTT CTACACTCCC AATTATGATG GTTTATCCTT TCTTACAAAA ATATTTTAAT CAAGGTGTCA TGGTTGGAGC GATTAAAGAG TAA
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Protein sequence | MKITHKSRRP KSLQEKIFDV LVYGMAVLLI LLIIYPLWFV IIASFSNPQD VATGAVWFWP KSWSLEGYKT LFAQPLIWRS YFNTILYTVA GTAFGLLVNI PVGYALSRRD LFGRKWISLL YVVPMFVTGG LIPIYLVTKN FGLLNTVWVM IVPFAVSPYN IIVARTFFQE SIPNGLWEAA QVDGSSTFRY FFQIVLPLSK AILAVIGFWT AVGIWNSWFN ALIYLTDQNL QPLQLILRQL LITNQTLQSQ ATGDVASQLR QTADMMKYAA IVVSTLPIMM VYPFLQKYFN QGVMVGAIKE
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