| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5754 |
|---|
| Symbol | |
|---|
| ID | 8886970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6117020 |
|---|
| End bp | 6117901 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003514477 |
|---|
| Protein GI | 291303199 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.460606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC ACCGTCCCGC GTGGATGGGC AAACCATCCC CATTGGTCAA AGCGGCCAAG
GCCGTCGCCC TGGTCATCGT CGTGGCCCTG GTGCTGTTCC CGTTCTGGAC GATCGTGGCG
ACCTCGATCG CCAGCCCCGA AGAGGTCATC GACAACGGCG GCTGGGTCGT CATCCCGACG
TCGTTCTCGT TCAAGGCTTA CGAGGACATC ATCTCCGGCG GCATCATCAC CGACGCGCTG
CTGCGCAGCG TCGGCATCAC CGTGGTCGGC ACCCTGTTGA GCCTGGTGGC GACGGTGTTC
CTGGCCTACG CGCTGTCGCG GCCGGGTGTG GTGGGCGGCA AGCCGATCCT GCTGCTGATC
CTGTTCACGT TCCTGTTCCC GCCCGCCATG ATCCCGTCCT ATCTGGTGGT TCAGGAACTG
GGTCTGAAGG AGAACTACCT GTCGCTGATC CTGCCGGTGC TGGTCAACGT GTTCAACCTG
GTGGTGATGC GCGGCTTCTT CCAGTCGGTG CCCGGCGAAC TCATCGAGGC CGCCCGGCTC
GACGGCGCCG GGGACTTCCG GATCCTCACC AGGGTCGTGA TGCCACTGTC CAAAGCGGTC
ATCGCGGTGG TCGGGCTGTT CTACGCCGTG GCGTACTGGA ACTCCTTCTT CACCGCGATC
CTCTACCTGG ACTCGGATCA GTGGCCGGTG CAGGCGATCC TGCGGCAGTA CGTCACCCAG
AACACCGCCA TCTCCGACAC CGCCGAATCG ACGGTCCAGA ACTCTCCACA GTCAACGAAG
ATGGCGGTCG TCGTGCTCGC CACCCTCCCC ATCGTGATCG TCTACCCGTT CGTCCAGCGG
TTCTTCGCCA AGGGCGTTCT CACCGGCGCG ATCAAATCCT AG
|
|---|
| Protein sequence | MSAHRPAWMG KPSPLVKAAK AVALVIVVAL VLFPFWTIVA TSIASPEEVI DNGGWVVIPT
SFSFKAYEDI ISGGIITDAL LRSVGITVVG TLLSLVATVF LAYALSRPGV VGGKPILLLI
LFTFLFPPAM IPSYLVVQEL GLKENYLSLI LPVLVNVFNL VVMRGFFQSV PGELIEAARL
DGAGDFRILT RVVMPLSKAV IAVVGLFYAV AYWNSFFTAI LYLDSDQWPV QAILRQYVTQ
NTAISDTAES TVQNSPQSTK MAVVVLATLP IVIVYPFVQR FFAKGVLTGA IKS
|
|---|
| |