Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4936 |
Symbol | |
ID | 8336290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5634322 |
End bp | 5635302 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644958035 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003115637 |
Protein GI | 256394073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00903447 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAC TGTCTACCGC CTCCGCACCC GGTCGGCGCG AGCCTCCGTC CGGCAACGTC CCCCGCGAGC GGGCCAAGGG CCGCGCGGTC TGGGAGGAGC GCCCGACCCT GGTCGGGCAG TTCGGCAAGG GCGTGGTCCT CACCGTCGTC GTATTGGCCG TGGTCCTGCC GCTGTACGCC ATCATTCTGA CCAGCTTCTC CAGCGAGGGC GCCATCACCC GGGCCGGCGG CAGCCTGGTC GTGGTGCCGG ACGGGCTGAG CCTGAGCGCC TACCGGGAGA TCTTCTCCAA CGGCGTGGTC ACCCGCGCCG TGGTGGTCAG CGTCGGGATC ACGGTCGTGG GCACCGCGGT GTCGATGGTC CTGAGCATCC TGTGCGCCTA CGGGCTGTCC CGGGTCCGCT CGTTCGGCCA CCGGTTCTTC CTGGGCGCGA TGATCTTCAC GATGTTCTTC GGCGGCGGTC TGATCCCCGG CTTCCTGGTG GTCACCTCTC TCCACGGCTA CGACAATTAC TGGGCGCTGA TCCTGCCCAG CTGTCTGTCG GTCTTCAACA TCCTCATCAT GCGGGGCTTC TACCAGGCCA CCGCCCAGGA GATGATCGAC GCCGCGCGGA TCGACGGCGC CGGGGAGTGG CGCATCCTGT GGTCGGTGGT GCTGCCCACG ACCAAGGCGG TGACCGCGGT GATGACCCTG TTCTATGCCG TCGGCTATTG GGGTTCGTGG TTCAACACCC TGCTGTACAT GCCGTTCGAC AACAACAAGT GGTCGCTGTC CTACGTGCTC TACGAATACG TCAACCTCGG CGCGAAGATG CCGGGCGTCG GCACCGCCGG TGCCGGCGAC ACGGTCCAGC ACCAGGTCGC CTCGCCGTTC GGAATCTCCA TGGCCGTGGT CGTGCTCACG CTCATCCCGA TCCTGGCCGT CTACCCCTTC CTGCAGAAGC ACTTCACCAA GGGCATGCTC ACCGGCGCCA TCAAGGGCTG A
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Protein sequence | MSALSTASAP GRREPPSGNV PRERAKGRAV WEERPTLVGQ FGKGVVLTVV VLAVVLPLYA IILTSFSSEG AITRAGGSLV VVPDGLSLSA YREIFSNGVV TRAVVVSVGI TVVGTAVSMV LSILCAYGLS RVRSFGHRFF LGAMIFTMFF GGGLIPGFLV VTSLHGYDNY WALILPSCLS VFNILIMRGF YQATAQEMID AARIDGAGEW RILWSVVLPT TKAVTAVMTL FYAVGYWGSW FNTLLYMPFD NNKWSLSYVL YEYVNLGAKM PGVGTAGAGD TVQHQVASPF GISMAVVVLT LIPILAVYPF LQKHFTKGML TGAIKG
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