Gene Athe_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2053 
Symbol 
ID7408266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2167490 
End bp2168380 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content35% 
IMG OID643716420 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002573903 
Protein GI222530021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA AGACAGCAGG TGATATAGTA TTTGAAGTTT TTAACTACAC AATAATGATA 
ATTTTGGCAA TTATAACTTT GTACCCATTT TTGCATGTCC TTGCTGTATC ATTAAATGAC
CCTTACGATG CAATAAAAGG TGGGATAACT ATCTTTCCCA GAAAATTTAC ATTAGTAAAT
TACATAGAGA CTTTAAATTA TCCTCAAATT CCATGGGCTG TATTTATAAC TGTATTAAGA
ACAGTGGTTG GAACAGCATT AGGAGTACTT TCGTCAGCTA TGGTTGCCTA TGTTATAAAT
CGAAAAGATT TTATTGCAAG AAAACCTGTT TCGATAATGT TTATTATTAC TATGTACATT
GGTGGGGGAC TTATACCTGA ATATATGCTC ATGCGAGGTC TTGGACTTAT GAACAATTTC
CTTGTTTACA TTCTGCCGGG GCTTATAAGT CCGTTTAATG TGATTGTCAT AAAATCTTAT
ATGGAGGGTA TTCCTTCCGA TGTTGAAGAG TCTGCAATGA TAGACGGTGC TAATGATTTT
TTGATATTCT GGAAGATAAT ATTGCCACTT TGTGCACCTG TAATTGCAAC TATAAGCTTG
TTTATTGCTG TGGGACATTG GAACTCATGG TTTGATACAT ACCTTTATTG CTCAAGTGAA
CCAAAGCTTA CAACCCTGCA ATATGAACTT CAAAAGATTT TATCAAATGC AGCAGCTTCA
TCTCAGGTAG ATTACTACAG TAACCTTGAC CCAAACAGAA CAATGAAAGT AACTCCTCAT
TCTCTCAGAA TGGCAATGAC CATAATTGTA ACTATGCCAA TATTGTTCGT TTATCCTTTT
GTTCAAAGAT ATTTTATTCA TGGGATGACA ATTGGTGCTG TAAAGAGCTA A
 
Protein sequence
MGKKTAGDIV FEVFNYTIMI ILAIITLYPF LHVLAVSLND PYDAIKGGIT IFPRKFTLVN 
YIETLNYPQI PWAVFITVLR TVVGTALGVL SSAMVAYVIN RKDFIARKPV SIMFIITMYI
GGGLIPEYML MRGLGLMNNF LVYILPGLIS PFNVIVIKSY MEGIPSDVEE SAMIDGANDF
LIFWKIILPL CAPVIATISL FIAVGHWNSW FDTYLYCSSE PKLTTLQYEL QKILSNAAAS
SQVDYYSNLD PNRTMKVTPH SLRMAMTIIV TMPILFVYPF VQRYFIHGMT IGAVKS