More than 300 homologs were found in PanDaTox collection
for query gene Amir_0447 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0447  binding-protein-dependent transport systems inner membrane component  100 
 
 
303 aa  588  1e-167  Actinosynnema mirum DSM 43827  Bacteria  normal  0.873799  n/a   
 
 
-
 
NC_013595  Sros_7724  putative sugar ABC transporter, permease protein  59.38 
 
 
312 aa  305  5.0000000000000004e-82  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0553  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
339 aa  193  4e-48  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1104  binding-protein-dependent transporter inner membrane component  38.44 
 
 
334 aa  184  1.0000000000000001e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.204963  normal  0.0432036 
 
 
-
 
NC_013172  Bfae_25440  carbohydrate ABC transporter membrane protein  38.61 
 
 
323 aa  183  4.0000000000000006e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0243999  n/a   
 
 
-
 
NC_013174  Jden_0235  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
330 aa  180  2.9999999999999997e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2193  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
337 aa  179  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7200  binding-protein-dependent transport systems inner membrane component  44.4 
 
 
332 aa  178  8e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3731  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
329 aa  177  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0879036  normal  0.0396091 
 
 
-
 
NC_013093  Amir_0402  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
330 aa  173  2.9999999999999996e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.781515  n/a   
 
 
-
 
NC_013172  Bfae_05720  carbohydrate ABC transporter membrane protein  33.7 
 
 
316 aa  171  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.239085  n/a   
 
 
-
 
NC_013131  Caci_7720  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
298 aa  167  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.829271 
 
 
-
 
NC_013595  Sros_9092  trehalose/maltose transport inner membrane protein  37.63 
 
 
326 aa  164  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.309735  normal 
 
 
-
 
NC_014210  Ndas_0658  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
331 aa  157  2e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.618019  normal  0.983661 
 
 
-
 
NC_013530  Xcel_1046  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
308 aa  156  3e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.03308  n/a   
 
 
-
 
NC_014210  Ndas_3336  binding-protein-dependent transport systems inner membrane component  39.4 
 
 
337 aa  150  3e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
330 aa  148  1.0000000000000001e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
324 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_014165  Tbis_1885  binding-protein-dependent transporter inner membrane component  36.21 
 
 
317 aa  140  1.9999999999999998e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.44963 
 
 
-
 
NC_009664  Krad_1114  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
319 aa  140  3.9999999999999997e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32149  normal  0.356013 
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
325 aa  137  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
337 aa  135  9e-31  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
309 aa  135  9.999999999999999e-31  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
309 aa  134  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_013093  Amir_0349  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
305 aa  132  6e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4929  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
311 aa  132  6e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.155715  normal 
 
 
-
 
NC_009380  Strop_0804  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
337 aa  132  1.0000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  0.606963  normal 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  32.76 
 
 
301 aa  130  2.0000000000000002e-29  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  31 
 
 
307 aa  130  3e-29  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
307 aa  130  4.0000000000000003e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  35.49 
 
 
307 aa  130  4.0000000000000003e-29  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
312 aa  129  5.0000000000000004e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_013517  Sterm_1525  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
292 aa  129  9.000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
301 aa  128  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
307 aa  128  1.0000000000000001e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
292 aa  128  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013757  Gobs_3933  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
320 aa  128  1.0000000000000001e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.292649  n/a   
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
356 aa  127  3e-28  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_008699  Noca_0060  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
289 aa  126  5e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0961  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
320 aa  126  5e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.158412  hitchhiker  0.000108715 
 
 
-
 
NC_013595  Sros_3340  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
338 aa  125  6e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.781064  normal  0.179396 
 
 
-
 
NC_007760  Adeh_4135  ABC sugar transporter, inner membrane subunit  33.33 
 
 
569 aa  125  1e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  35.07 
 
 
292 aa  124  2e-27  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_013131  Caci_3156  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
304 aa  124  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.024116  normal  0.392098 
 
 
-
 
NC_011899  Hore_20460  binding-protein-dependent transport systems inner membrane component  27.83 
 
 
321 aa  124  2e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000522199  n/a   
 
 
-
 
NC_009664  Krad_4091  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
287 aa  124  2e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.688283  normal  0.229171 
 
 
-
 
NC_011145  AnaeK_4266  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
569 aa  124  2e-27  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  29.37 
 
 
296 aa  123  3e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3466  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
342 aa  124  3e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  34.42 
 
 
305 aa  123  3e-27  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010676  Bphyt_7207  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
296 aa  123  4e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5668  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
315 aa  123  4e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2631  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
305 aa  123  4e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  29.34 
 
 
262 aa  123  5e-27  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
296 aa  123  5e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_009621  Smed_5859  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
301 aa  122  5e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.173304  normal 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
308 aa  122  7e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4988  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
301 aa  122  7e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3408  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
308 aa  121  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.166359  normal  0.855546 
 
 
-
 
NC_012669  Bcav_2552  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
299 aa  122  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.235202 
 
 
-
 
NC_012669  Bcav_1096  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
315 aa  122  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175054  normal 
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  31.34 
 
 
308 aa  121  1.9999999999999998e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
316 aa  121  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
304 aa  120  1.9999999999999998e-26  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
310 aa  120  1.9999999999999998e-26  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
292 aa  120  3e-26  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011368  Rleg2_5475  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
312 aa  120  3e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.44322 
 
 
-
 
NC_011891  A2cp1_4288  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
569 aa  120  3e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1419  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
314 aa  120  3.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  0.906597  n/a   
 
 
-
 
NC_008786  Veis_3450  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
307 aa  120  3.9999999999999996e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2109  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
312 aa  119  3.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.376983 
 
 
-
 
NC_013131  Caci_2610  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
334 aa  119  4.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.17709  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
316 aa  119  7e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
299 aa  119  7e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
316 aa  119  9e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_012803  Mlut_04590  permease component of ABC-type sugar transporter  30.6 
 
 
323 aa  119  9e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.359187  n/a   
 
 
-
 
NC_014212  Mesil_2465  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
296 aa  118  9.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.603266  normal  0.170133 
 
 
-
 
NC_013131  Caci_8465  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
315 aa  118  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.511569  normal  0.0740219 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  32.2 
 
 
294 aa  118  9.999999999999999e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011369  Rleg2_3621  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
305 aa  118  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.980812  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
290 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  29.23 
 
 
317 aa  117  1.9999999999999998e-25  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
299 aa  117  1.9999999999999998e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6633  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
294 aa  117  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.61386 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
293 aa  117  1.9999999999999998e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
CP001509  ECD_01288  predicted sugar transporter subunit: membrane component of ABC superfamily  33.22 
 
 
293 aa  117  3e-25  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  34.11 
 
 
293 aa  117  3e-25  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01299  hypothetical protein  33.22 
 
 
293 aa  117  3e-25  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2291  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
311 aa  117  3e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.276592  normal 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  30.51 
 
 
312 aa  117  3e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  34.8 
 
 
288 aa  117  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_010468  EcolC_2314  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
293 aa  117  3e-25  Escherichia coli ATCC 8739  Bacteria  normal  0.71913  normal 
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
295 aa  117  3e-25  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_009800  EcHS_A1426  putative sugar ABC transporter, permease protein  33.22 
 
 
293 aa  117  3e-25  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  34.78 
 
 
287 aa  117  3.9999999999999997e-25  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
312 aa  116  3.9999999999999997e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010498  EcSMS35_1811  putative sugar ABC transporter, permease protein  33.22 
 
 
293 aa  116  5e-25  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_1956  putative sugar ABC transporter, permease protein  33.22 
 
 
293 aa  116  5e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.798746  normal 
 
 
-
 
NC_012792  Vapar_6266  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
320 aa  116  5e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
294 aa  116  5e-25  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
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