More than 300 homologs were found in PanDaTox collection
for query gene Jden_0235 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_0235  binding-protein-dependent transport systems inner membrane component  100 
 
 
330 aa  659    Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1046  binding-protein-dependent transport systems inner membrane component  51.33 
 
 
308 aa  300  2e-80  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.03308  n/a   
 
 
-
 
NC_009664  Krad_3731  binding-protein-dependent transport systems inner membrane component  53.65 
 
 
329 aa  290  2e-77  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0879036  normal  0.0396091 
 
 
-
 
NC_013172  Bfae_05720  carbohydrate ABC transporter membrane protein  49.45 
 
 
316 aa  281  1e-74  Brachybacterium faecium DSM 4810  Bacteria  normal  0.239085  n/a   
 
 
-
 
NC_008578  Acel_0553  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
339 aa  236  3e-61  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2193  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
337 aa  195  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0402  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
330 aa  183  4.0000000000000006e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.781515  n/a   
 
 
-
 
NC_013172  Bfae_25440  carbohydrate ABC transporter membrane protein  34.44 
 
 
323 aa  182  9.000000000000001e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0243999  n/a   
 
 
-
 
NC_013595  Sros_9092  trehalose/maltose transport inner membrane protein  36.9 
 
 
326 aa  182  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.309735  normal 
 
 
-
 
NC_014165  Tbis_1104  binding-protein-dependent transporter inner membrane component  34.47 
 
 
334 aa  175  9e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.204963  normal  0.0432036 
 
 
-
 
NC_013131  Caci_7720  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
298 aa  172  5e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.829271 
 
 
-
 
NC_014210  Ndas_0658  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
331 aa  171  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.618019  normal  0.983661 
 
 
-
 
NC_013595  Sros_7724  putative sugar ABC transporter, permease protein  34.84 
 
 
312 aa  170  3e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7200  binding-protein-dependent transport systems inner membrane component  38.32 
 
 
332 aa  168  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0447  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
303 aa  158  1e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.873799  n/a   
 
 
-
 
NC_014210  Ndas_3336  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
337 aa  157  2e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
337 aa  145  1e-33  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
324 aa  144  3e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
291 aa  138  1e-31  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
304 aa  138  1e-31  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  30.95 
 
 
325 aa  137  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_009380  Strop_0804  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
337 aa  135  9e-31  Salinispora tropica CNB-440  Bacteria  normal  0.606963  normal 
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
330 aa  134  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_014165  Tbis_1885  binding-protein-dependent transporter inner membrane component  31.37 
 
 
317 aa  134  3e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.44963 
 
 
-
 
NC_011899  Hore_20460  binding-protein-dependent transport systems inner membrane component  29.21 
 
 
321 aa  132  6.999999999999999e-30  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000522199  n/a   
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  28.85 
 
 
318 aa  131  1.0000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  30.42 
 
 
294 aa  131  1.0000000000000001e-29  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  28.05 
 
 
312 aa  130  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5212  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
312 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.481723 
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
294 aa  131  2.0000000000000002e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  30.42 
 
 
294 aa  131  2.0000000000000002e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_7207  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
296 aa  130  4.0000000000000003e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0349  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
305 aa  130  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1525  binding-protein-dependent transport systems inner membrane component  28.41 
 
 
292 aa  129  6e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2349  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
307 aa  129  8.000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.552621 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  28.76 
 
 
307 aa  129  9.000000000000001e-29  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_011368  Rleg2_5475  binding-protein-dependent transport systems inner membrane component  27.53 
 
 
312 aa  129  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.44322 
 
 
-
 
NC_009664  Krad_0386  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
304 aa  128  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.610758  normal  0.0357706 
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  29.05 
 
 
296 aa  127  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
262 aa  127  4.0000000000000003e-28  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  27.63 
 
 
314 aa  127  4.0000000000000003e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  28.22 
 
 
310 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_014211  Ndas_4929  binding-protein-dependent transport systems inner membrane component  29.07 
 
 
311 aa  124  1e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.155715  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  28.23 
 
 
296 aa  125  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_007802  Jann_3554  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
311 aa  124  2e-27  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  27.18 
 
 
299 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_16180  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
436 aa  124  3e-27  Halothermothrix orenii H 168  Bacteria  normal  0.0238407  n/a   
 
 
-
 
NC_013131  Caci_2109  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
312 aa  124  3e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.376983 
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  26.82 
 
 
319 aa  123  4e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
309 aa  123  4e-27  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
309 aa  123  6e-27  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
310 aa  122  7e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_011145  AnaeK_4266  binding-protein-dependent transport systems inner membrane component  26.83 
 
 
569 aa  122  8e-27  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  28.9 
 
 
306 aa  122  9e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011353  ECH74115_1956  putative sugar ABC transporter, permease protein  28.09 
 
 
293 aa  122  9e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.798746  normal 
 
 
-
 
NC_008541  Arth_3466  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
342 aa  122  9.999999999999999e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  28.71 
 
 
312 aa  122  9.999999999999999e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01288  predicted sugar transporter subunit: membrane component of ABC superfamily  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2335  binding-protein-dependent transport systems inner membrane component  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli DH1  Bacteria  normal  0.102296  n/a   
 
 
-
 
NC_013595  Sros_3340  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
338 aa  121  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.781064  normal  0.179396 
 
 
-
 
NC_010468  EcolC_2314  binding-protein-dependent transport systems inner membrane component  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli ATCC 8739  Bacteria  normal  0.71913  normal 
 
 
-
 
NC_013131  Caci_2610  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
334 aa  121  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.17709  normal 
 
 
-
 
NC_010498  EcSMS35_1811  putative sugar ABC transporter, permease protein  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3555  putative ABC transporter permease protein  30.07 
 
 
317 aa  121  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.34254  normal 
 
 
-
 
NC_009620  Smed_3590  binding-protein-dependent transport systems inner membrane component  28.79 
 
 
301 aa  120  1.9999999999999998e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.657903  normal 
 
 
-
 
NC_012892  B21_01299  hypothetical protein  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1426  putative sugar ABC transporter, permease protein  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1521  putative sugar ABC transporter, permease protein  28.09 
 
 
293 aa  121  1.9999999999999998e-26  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
330 aa  121  1.9999999999999998e-26  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4564  binding-protein-dependent transport systems inner membrane component  28.71 
 
 
345 aa  120  3e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4288  binding-protein-dependent transport systems inner membrane component  27.18 
 
 
569 aa  120  3e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0501  binding-protein-dependent transport systems inner membrane component  27.96 
 
 
365 aa  120  3e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  30.45 
 
 
292 aa  120  3.9999999999999996e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
322 aa  120  3.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  26.01 
 
 
293 aa  119  6e-26  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_009620  Smed_4329  binding-protein-dependent transport systems inner membrane component  27.53 
 
 
309 aa  119  6e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0434884 
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  25.5 
 
 
294 aa  119  7e-26  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4063  maltosaccharide ABC transporter, permease protein  27.09 
 
 
433 aa  119  7.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  0.373141  n/a   
 
 
-
 
NC_005957  BT9727_3753  maltosaccharide ABC transporter, permease  27.09 
 
 
433 aa  119  7.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.274172  n/a   
 
 
-
 
NC_006274  BCZK3769  maltosaccharide ABC transporter, permease  27.09 
 
 
433 aa  119  7.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4031  maltosaccharide ABC transporter, permease protein  27.09 
 
 
433 aa  119  7.999999999999999e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_3840  binding-protein-dependent transport systems inner membrane component  27.09 
 
 
433 aa  119  7.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00611933  n/a   
 
 
-
 
NC_011658  BCAH187_A4137  maltosaccharide ABC transporter, permease protein  27.09 
 
 
433 aa  119  7.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  0.355627  n/a   
 
 
-
 
NC_007760  Adeh_4135  ABC sugar transporter, inner membrane subunit  26.33 
 
 
569 aa  118  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  26.6 
 
 
315 aa  118  9.999999999999999e-26  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  28.35 
 
 
315 aa  118  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4118  maltosaccharide ABC transporter, permease protein  26.76 
 
 
433 aa  118  9.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  0.0141097  n/a   
 
 
-
 
NC_005945  BAS3921  maltosaccharide ABC transporter permease  27.09 
 
 
433 aa  117  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4228  maltosaccharide ABC transporter permease protein  27.09 
 
 
433 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3645  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
318 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.415839 
 
 
-
 
NC_007948  Bpro_1259  binding-protein-dependent transport systems inner membrane component  27.67 
 
 
300 aa  117  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
324 aa  117  1.9999999999999998e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1056  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
313 aa  117  1.9999999999999998e-25  Thermofilum pendens Hrk 5  Archaea  normal  0.355645  n/a   
 
 
-
 
NC_008699  Noca_1419  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
314 aa  118  1.9999999999999998e-25  Nocardioides sp. JS614  Bacteria  normal  0.906597  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
319 aa  117  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0645  binding-protein-dependent transport systems inner membrane component  26.64 
 
 
309 aa  117  1.9999999999999998e-25  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000282921  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  28.28 
 
 
317 aa  117  1.9999999999999998e-25  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011894  Mnod_1414  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
314 aa  117  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  28.72 
 
 
291 aa  117  3e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_009077  Mjls_3996  binding-protein-dependent transport systems inner membrane component  29.07 
 
 
308 aa  117  3e-25  Mycobacterium sp. JLS  Bacteria  normal  0.172958  normal  0.378531 
 
 
-
 
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