Gene ECD_01288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01288 
SymbolycjO 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1359588 
End bp1360469 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID 
Productpredicted sugar transporter subunit: membrane component of ABC superfamily 
Protein accessionACT43176 
Protein GI253977506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGC TTTTTTCAGG TCGTTCCGAT ATGCCCTTTG CGCTGCTGCT TCTCGCGCCC 
AGCTTATTAC TGCTGGGCGG TCTGGTGGCG TGGCCGATGG TGTCGAATAT CGAAATCAGT
TTTTTACGTC TGCCGCTCAA TCCCAACATC GAGTCAACGT TTGTTGGGGT GAGCAACTAT
GTGCGTATCC TCTCCGATCC CGACTTCTGG CATTCGCTGT GGATGACGGT CTGGTATACC
GCGCTGGTGG TGGCGGGCAG CACCGTGCTC GGGCTGGCGG TGGCGATGTT TTTCAACCGC
GAGTTCCGCC TGCGCAAAAC CGCGCGTTCG CTGGTGATCC TCTCCTACGT AACGCCGTCC
ATTTCGCTGG TGTTCGCCTG GAAATACATG TTCAACAACG GCTACGGCAT TGTTAACTAC
CTCGGCGTCG ATCTTCTGCA TCTCTATGAG CAGGCACCGC TGTGGTTCGA TAATCCGGGC
AGTAGCTTTG TGCTGGTGGT GCTGTTCGCC ATCTGGCGCT ACTTCCCGTA TGCCTTTATC
TCGTTTCTGG CGATTTTGCA GACCATCGAC AAATCGCTGT ACGAAGCGGC AGAGATGGAT
GGCGCTAATG CCTGGCAACG GTTTCGTATC GTCACGCTGC CCGCAATTAT GCCGGTCCTG
GCGACGGTGG TGACACTGCG CACCATCTGG ATGTTCTACA TGTTCGCGGA TGTTTATTTG
CTGACGACCA AGGTCGATAT TCTCGGTGTA TATCTCTACA AAACCGCCTT TGCCTTTAAT
GATTTAGGAA AAGCGGCGGC GATCTCGGTG GTGCTCTTCA TCATTATTTT CGCTGTCATT
CTGCTGACCA GGAAACGGGT GAACCTCAAT GGCAACAAAT AA
 
Protein sequence
MNRLFSGRSD MPFALLLLAP SLLLLGGLVA WPMVSNIEIS FLRLPLNPNI ESTFVGVSNY 
VRILSDPDFW HSLWMTVWYT ALVVAGSTVL GLAVAMFFNR EFRLRKTARS LVILSYVTPS
ISLVFAWKYM FNNGYGIVNY LGVDLLHLYE QAPLWFDNPG SSFVLVVLFA IWRYFPYAFI
SFLAILQTID KSLYEAAEMD GANAWQRFRI VTLPAIMPVL ATVVTLRTIW MFYMFADVYL
LTTKVDILGV YLYKTAFAFN DLGKAAAISV VLFIIIFAVI LLTRKRVNLN GNK