| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4988 |
|---|
| Symbol | |
|---|
| ID | 8007579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 371329 |
|---|
| End bp | 372234 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644821903 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973163 |
|---|
| Protein GI | 241113328 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCACCG CAGTCATGAC ATCGCTGGAC ACGAAATCGC GTGCCGCATC CCGCGGCATG
AGCGACATCC GGATTCGCAA TCTCTTCATC ATTCCGACGA TCCTGTTCCT GATCGTCTTC
AACATCTTTC CGCTGATCTA TTCGCTCGGC TATTCCTTCA CCGACTTTCG CGCTTCGTCG
AACGCGCCGG CCAACTTCGT CGGCCTGCAG AACTACCGCG AGTTGCTGAA CGATCCTTTC
ATCTGGTCGA ATTTCGCCAT CACCGCGAAA TATGTGATCG TCTCTGTGAC GGGGCAGGTG
ATCGTCGGCT TCGGCACCGC GATGCTGCTC AACCGCGATA TCCCGCTGAA GGGTCTTCTG
ACGACGCTGC TGCTGCTGCC GATGATGCTC TCGATGGCAG TGGTCGGCCT CTTCTGGAAG
CTGCTCTACG ACCCGTCCTT CGGCATCATC AACTACGCAC TCGGCCTCGG CTCCTTCGAG
TGGCTGTCGA ATCCGGACAT GGCGCTCTAT GCGGTCGCAA TCACGGACAT CTGGATGTGG
TCGCCCTTCG TGATGCTGCT GTCGCTTGCC GGCCTTTCGG CCGTGCCAAA GCATCTCTAC
GAGGCAGCGG CGATCGACCG GGCGGGGCCG TTTTATACAT TCTTCCGCAT CACGCTGCCG
CTGGTGGCGC CGATCCTGAT GATCGCAATC ATCTTCCGCA CGATGGAGGC CTTCAAGACC
TTCGACCTCG CCTACATCCT GACCAGCCAA CCGACGACCG AGGTGATCTC CATCCGGCTC
TACAAGATGG CCTTCCAGGA ATGGCAGACG GGGCGCTCCT GCGCACTCGC CTACATCGTC
CTGATCATGG TTCTCGCCAT CACCAACATC TACGTCAAGT ACCTCAACAA AGTGAAGGAG
CGCTGA
|
|---|
| Protein sequence | MATAVMTSLD TKSRAASRGM SDIRIRNLFI IPTILFLIVF NIFPLIYSLG YSFTDFRASS
NAPANFVGLQ NYRELLNDPF IWSNFAITAK YVIVSVTGQV IVGFGTAMLL NRDIPLKGLL
TTLLLLPMML SMAVVGLFWK LLYDPSFGII NYALGLGSFE WLSNPDMALY AVAITDIWMW
SPFVMLLSLA GLSAVPKHLY EAAAIDRAGP FYTFFRITLP LVAPILMIAI IFRTMEAFKT
FDLAYILTSQ PTTEVISIRL YKMAFQEWQT GRSCALAYIV LIMVLAITNI YVKYLNKVKE
R
|
|---|
| |