| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1046 |
|---|
| Symbol | |
|---|
| ID | 8648557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1123437 |
|---|
| End bp | 1124363 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003325635 |
|---|
| Protein GI | 269955846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.03308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACCA CCACCGTGCT CGGCGCGCCC GTCCGGCAGC GCCGCAAGCC CGTCACGCCC
TACCTGCTGA TGATCCCCGC GGTCGCCGTG CTGCTGCTCG GTCTCGGGTA CCCGGTCTAC
TGGCAGATCG TCACGTCGTT CCAGGAGTTC GGCCTCGCGC AGCAGTTCGG CCAGCCGCCG
ACGTTCGCCG GCCTGGACAA CTACGCCCGC ATCTTCGCTG ACGACCGCAC CTTCGCCGTC
GTCGTCCGGT CCATCGTCTT CTGCCTGGTG ACCGCGTTCT CGACCGTCAT CCTGGGCCTG
CTGCTCGCCC TGCTGATGCG TGCGGTCCAC GGCGCCGTCA AGGTGATCCT CCAGATCGCG
CTGCTGCTCG CGTGGGCCAC CCCCGTCGTC GCGTCGGTGA CCGTGTTCCG CTGGCTCTTC
GACTCGCGCA CCGGCGTCAT CAACTGGCTG CTCGTGCAGG CCGGGCTGAC GCAGTACCAG
GGGCACAACT GGCTCGCCCA GCCGCTGAGC TTCTTCTTCG TGGCCGCTCT GATCATCGTG
TGGATGTCCG TGCCGTTCGT CGCGCTCTCG CTGTTCGCCG GGCTCACCCA GGTGCCGGAC
GAGCTGCTGG AGGCCGCGCG GATCGACGGC GCCGGCAGCA CGCAGATCCT GGTGCGCATC
CTCATGCCGC TCGTGCGGCC CGTGCTCGCG ATCGTGCTGC TGCTCCAGAT CATCTGGAAC
CTGCGCGTCT TCGCGCAGAT CCGGCTCCTG CAGGACGCCG GTGCCGACGT CCGCCGCACC
AACCTGCTGG GCAACCTGAT CTACGAGCTG GGCATGGGAT CGCAGAACTT CGGCGGTGCG
GCCGCCGTGT CGATCTTCGT CCTGCTGCTC ACCATCGCGC TGTCGGCACC GTACGTCCGC
AGCCTCATGA AGGAGGACGC GGCATGA
|
|---|
| Protein sequence | MATTTVLGAP VRQRRKPVTP YLLMIPAVAV LLLGLGYPVY WQIVTSFQEF GLAQQFGQPP
TFAGLDNYAR IFADDRTFAV VVRSIVFCLV TAFSTVILGL LLALLMRAVH GAVKVILQIA
LLLAWATPVV ASVTVFRWLF DSRTGVINWL LVQAGLTQYQ GHNWLAQPLS FFFVAALIIV
WMSVPFVALS LFAGLTQVPD ELLEAARIDG AGSTQILVRI LMPLVRPVLA IVLLLQIIWN
LRVFAQIRLL QDAGADVRRT NLLGNLIYEL GMGSQNFGGA AAVSIFVLLL TIALSAPYVR
SLMKEDAA
|
|---|
| |