More than 300 homologs were found in PanDaTox collection
for query gene Sked_07100 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  100 
 
 
318 aa  635    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  70.39 
 
 
311 aa  423  1e-117  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  68.61 
 
 
322 aa  400  9.999999999999999e-111  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  59.09 
 
 
307 aa  348  6e-95  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  60.49 
 
 
318 aa  344  1e-93  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_014210  Ndas_1084  binding-protein-dependent transport systems inner membrane component  57.3 
 
 
315 aa  276  3e-73  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.31256  normal  0.442716 
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  47.76 
 
 
312 aa  256  2e-67  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  44.29 
 
 
318 aa  232  5e-60  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0964  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
313 aa  222  6e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.194798  decreased coverage  0.00518822 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
306 aa  215  7e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011988  Avi_5709  ABC transporter membrane spanning protein (sugar)  38.41 
 
 
316 aa  204  1e-51  Agrobacterium vitis S4  Bacteria  normal  0.673224  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
308 aa  203  2e-51  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  39.02 
 
 
295 aa  204  2e-51  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
299 aa  197  1.0000000000000001e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  36.22 
 
 
317 aa  195  8.000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  40.07 
 
 
322 aa  188  8e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
310 aa  186  3e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
318 aa  186  5e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
318 aa  185  8e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_014151  Cfla_2400  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
338 aa  184  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00254991 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  33.23 
 
 
320 aa  182  6e-45  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
309 aa  182  7e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
296 aa  181  2e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
306 aa  180  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  36.88 
 
 
287 aa  180  2.9999999999999997e-44  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
307 aa  180  2.9999999999999997e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  37.02 
 
 
307 aa  180  2.9999999999999997e-44  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
303 aa  179  5.999999999999999e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  33.33 
 
 
310 aa  179  7e-44  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
305 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
316 aa  178  1e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0750  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
290 aa  177  2e-43  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  37.74 
 
 
294 aa  176  3e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_012669  Bcav_2602  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
306 aa  176  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0924232  normal 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  35.67 
 
 
320 aa  176  5e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
310 aa  176  5e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
310 aa  176  5e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
313 aa  176  6e-43  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
307 aa  176  6e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
314 aa  176  7e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_0635  binding-protein-dependent transport systems inner membrane component  38.51 
 
 
314 aa  176  7e-43  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00123951  n/a   
 
 
-
 
NC_010483  TRQ2_0660  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
314 aa  175  9e-43  Thermotoga sp. RQ2  Bacteria  normal  0.0178534  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  36.69 
 
 
291 aa  175  9e-43  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
297 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
319 aa  174  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2612  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
365 aa  174  1.9999999999999998e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
321 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
293 aa  173  3.9999999999999995e-42  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
309 aa  172  5e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
325 aa  172  5e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
312 aa  172  5e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
295 aa  171  1e-41  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_008010  Dgeo_2725  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
315 aa  171  1e-41  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.104995  n/a   
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
315 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
308 aa  171  1e-41  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  34.23 
 
 
314 aa  170  2e-41  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0918  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
298 aa  171  2e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  34.23 
 
 
314 aa  170  2e-41  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
321 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
299 aa  171  2e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  30.95 
 
 
315 aa  171  2e-41  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1048  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
308 aa  171  2e-41  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
318 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
292 aa  171  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
305 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  34 
 
 
310 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
283 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
294 aa  170  3e-41  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
313 aa  169  5e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
299 aa  169  5e-41  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  32.44 
 
 
310 aa  169  5e-41  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
292 aa  169  7e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
305 aa  169  8e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
316 aa  168  9e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
307 aa  168  9e-41  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
308 aa  168  1e-40  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
309 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
292 aa  168  1e-40  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.36 
 
 
305 aa  168  1e-40  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  32.11 
 
 
310 aa  167  2e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  32.26 
 
 
301 aa  167  2e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
312 aa  167  2e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.12 
 
 
321 aa  167  2.9999999999999998e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
310 aa  167  2.9999999999999998e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1731  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
301 aa  167  2.9999999999999998e-40  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000730006  n/a   
 
 
-
 
NC_012669  Bcav_0179  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
315 aa  166  2.9999999999999998e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
311 aa  166  4e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  33.97 
 
 
317 aa  166  5e-40  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
335 aa  166  5.9999999999999996e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
306 aa  165  6.9999999999999995e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
291 aa  165  6.9999999999999995e-40  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  32.67 
 
 
310 aa  165  6.9999999999999995e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
299 aa  165  8e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
308 aa  165  8e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
316 aa  165  8e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  33.92 
 
 
310 aa  165  9e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  33.57 
 
 
310 aa  165  1.0000000000000001e-39  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  33.57 
 
 
310 aa  164  1.0000000000000001e-39  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
311 aa  165  1.0000000000000001e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
326 aa  165  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
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