| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07100 |
|---|
| Symbol | |
|---|
| ID | 8632347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 814015 |
|---|
| End bp | 814971 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate ABC transporter membrane protein |
|---|
| Protein accession | YP_003313500 |
|---|
| Protein GI | 269794045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.790586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CTGACCTGAA GGGGCGCACA GACGCACCCC CCTCCCCCGC GGCACCCGAC
GCCGCCGCGC GCTCGCTCAG CGCCCGTCGG CGCTCCGACA CCATCCGCGG CTGGATGTAC
ATGGCGCCGT TCGCGATCGC CTTCCTGCTG TTCCTGGTCT GGCCGACCGT CTCCGGGTTC
TTCATGAGCT TCACCGGGCG CAGCCTCACC GGCGCCGGGT CCGAGCTCGT GGGGTTCGCC
AACTACACCG AGGCCTTCGC CGACTCCGAG ATGTGGAAGT CGCTGTGGAA CACGGTCGTG
TTCACCGTGC TCAGCACCAT CCCGCTCGTC GTCGTGGCCC TCCTGCTGGC CACCCTGGTC
AACATGAACC TCAAGGGCCA GTGGGTCTGG CGGCTGTCGT TCTTCATGCC GTTCCTGCTC
GCCTCGACCG TCGTCTCGCA GTTCTGGCTC TGGATGTACA ACCCGCAGCT CGGCCTGGTC
AACGAGGTCC TCGGCTGGGT CGGGATCGAG CCGAAGGCCT GGCTGCAAGA CCCGTCGACC
GCGATGATGT CCGTCGTGGT GACCACCGTC TGGTGGACCG TGGGCTTCAA CTTCCTGCTC
TACCTGTCCG CCCTCCAGAA CATCCCGGAC CACCAGTACG AGGCGGCCGC GCTCGACGGC
GCGAGCACCC GCCGCCAGTT CTTCTCGATC ACGCTGCCCC AGCTGGGCCC GACGACCGTC
CTCGTGTCGA TCCTGCAGCT GCTCGCCTCG CTCAAGGTCT TCGACCAGAT CTACCAGATG
ACCGGTGGTG GCCCCGGCGG CGCGACCCGC CCGATCCTCC AGTACGTCTA CGAGGTCGGC
TTCACCGGGT ACCGGCTGGG CTACGCGTCG GCGATCTCGT ACATCTTCTT CTTCCTCATC
GTCGTCGTGT CCCTCGTCAA CATCCTCGTC ATCAACCGCA GAGGAGCACG GTCGTGA
|
|---|
| Protein sequence | MTTPDLKGRT DAPPSPAAPD AAARSLSARR RSDTIRGWMY MAPFAIAFLL FLVWPTVSGF
FMSFTGRSLT GAGSELVGFA NYTEAFADSE MWKSLWNTVV FTVLSTIPLV VVALLLATLV
NMNLKGQWVW RLSFFMPFLL ASTVVSQFWL WMYNPQLGLV NEVLGWVGIE PKAWLQDPST
AMMSVVVTTV WWTVGFNFLL YLSALQNIPD HQYEAAALDG ASTRRQFFSI TLPQLGPTTV
LVSILQLLAS LKVFDQIYQM TGGGPGGATR PILQYVYEVG FTGYRLGYAS AISYIFFFLI
VVVSLVNILV INRRGARS
|
|---|
| |