More than 300 homologs were found in PanDaTox collection
for query gene GM21_0268 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  83.37 
 
 
457 aa  779  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  99.12 
 
 
456 aa  918  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  82.28 
 
 
457 aa  770  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  84.87 
 
 
456 aa  812  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  100 
 
 
456 aa  927  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_007498  Pcar_2718  two component signal transduction response regulator  58.94 
 
 
467 aa  535  1e-150  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0751  two component, sigma54 specific, Fis family transcriptional regulator  50.75 
 
 
485 aa  475  1e-133  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0880271  normal 
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  47.96 
 
 
491 aa  442  1e-123  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_1847  two component, sigma54 specific, Fis family transcriptional regulator  47.7 
 
 
459 aa  439  1e-122  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.122843  normal  0.436579 
 
 
-
 
NC_002939  GSU3217  sigma-54 dependent DNA-binding response regulator  47.97 
 
 
501 aa  437  1e-121  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  50.11 
 
 
448 aa  430  1e-119  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0925  two component, sigma-54 specific, Fis family transcriptional regulator  47.66 
 
 
500 aa  429  1e-119  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0789  two component, sigma54 specific, transcriptional regulator, Fis family  49.45 
 
 
448 aa  426  1e-118  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  46.19 
 
 
461 aa  423  1e-117  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  47.05 
 
 
460 aa  424  1e-117  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  49.67 
 
 
454 aa  421  1e-116  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1577  two component, sigma54 specific, transcriptional regulator, Fis family  45.65 
 
 
458 aa  411  1e-113  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  46 
 
 
460 aa  406  1e-112  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  47.67 
 
 
454 aa  403  1e-111  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_011146  Gbem_2658  two component, sigma54 specific, transcriptional regulator, Fis family  45.73 
 
 
458 aa  404  1e-111  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1826  two component, sigma54 specific, transcriptional regulator, Fis family  47.67 
 
 
455 aa  404  1e-111  Geobacter lovleyi SZ  Bacteria  normal  0.048867  n/a   
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  46.49 
 
 
455 aa  399  1e-110  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  44.81 
 
 
473 aa  400  1e-110  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3158  two component, sigma54 specific, Fis family transcriptional regulator  46.43 
 
 
462 aa  399  1e-110  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4192  two component, sigma-54 specific, Fis family transcriptional regulator  45.25 
 
 
454 aa  397  1e-109  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00227342  n/a   
 
 
-
 
NC_012918  GM21_3903  two component, sigma54 specific, transcriptional regulator, Fis family  46.46 
 
 
455 aa  397  1e-109  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000574971 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  46.27 
 
 
452 aa  392  1e-108  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  44.16 
 
 
470 aa  392  1e-108  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_008609  Ppro_3351  two component, sigma54 specific, Fis family transcriptional regulator  47.01 
 
 
465 aa  392  1e-108  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0372  sigma-54 dependent DNA-binding response regulator  46.8 
 
 
461 aa  392  1e-108  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  44.91 
 
 
461 aa  392  1e-108  Geobacter metallireducens GS-15  Bacteria  hitchhiker  1.96128e-05  normal 
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  43.94 
 
 
473 aa  392  1e-108  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  45.23 
 
 
456 aa  392  1e-108  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  45.99 
 
 
480 aa  394  1e-108  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  46 
 
 
453 aa  392  1e-108  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_011146  Gbem_2805  two component, sigma54 specific, transcriptional regulator, Fis family  45.84 
 
 
478 aa  392  1e-108  Geobacter bemidjiensis Bem  Bacteria  normal  0.228775  n/a   
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  43.94 
 
 
473 aa  392  1e-108  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  45.63 
 
 
478 aa  389  1e-107  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.17702e-05 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  45.01 
 
 
480 aa  388  1e-107  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  43.23 
 
 
459 aa  390  1e-107  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  44.81 
 
 
455 aa  390  1e-107  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  44.86 
 
 
461 aa  391  1e-107  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  44.22 
 
 
454 aa  385  1e-106  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  44.64 
 
 
461 aa  388  1e-106  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  45.3 
 
 
462 aa  387  1e-106  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  45 
 
 
453 aa  385  1e-106  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  44.64 
 
 
461 aa  388  1e-106  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  44.64 
 
 
461 aa  388  1e-106  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  44.64 
 
 
461 aa  388  1e-106  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  45.34 
 
 
480 aa  385  1e-106  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_010814  Glov_3407  two component, sigma54 specific, transcriptional regulator, Fis family  46.14 
 
 
458 aa  388  1e-106  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  44.2 
 
 
461 aa  385  1e-105  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  45.37 
 
 
451 aa  384  1e-105  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  44.81 
 
 
453 aa  384  1e-105  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  45.3 
 
 
458 aa  383  1e-105  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  43.95 
 
 
480 aa  384  1e-105  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
NC_009483  Gura_1840  two component, sigma-54 specific, Fis family transcriptional regulator  46.32 
 
 
456 aa  382  1e-105  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  4.68493e-08  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  44.91 
 
 
470 aa  384  1e-105  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  45.18 
 
 
458 aa  384  1e-105  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  45.03 
 
 
481 aa  383  1e-105  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  45.66 
 
 
454 aa  384  1e-105  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2343  two component, sigma54 specific, Fis family transcriptional regulator  42.37 
 
 
475 aa  379  1e-104  Pseudomonas putida F1  Bacteria  normal  0.835742  normal 
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  44.88 
 
 
458 aa  381  1e-104  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_002939  GSU2524  sigma-54 dependent DNA-binding response regulator  46.68 
 
 
464 aa  381  1e-104  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3419  two component, sigma54 specific, transcriptional regulator, Fis family  42.37 
 
 
475 aa  378  1e-104  Pseudomonas putida KT2440  Bacteria  normal  0.0592604  normal  0.514799 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  45.08 
 
 
457 aa  381  1e-104  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2145  two component signal transduction response regulator  44.05 
 
 
492 aa  378  1e-103  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0344  two component Fis family transcriptional regulator  45.23 
 
 
452 aa  376  1e-103  Chlorobium luteolum DSM 273  Bacteria  normal  0.0882822  normal  0.355114 
 
 
-
 
NC_008009  Acid345_2782  two component, sigma54 specific, Fis family transcriptional regulator  43.74 
 
 
463 aa  377  1e-103  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.795323  normal 
 
 
-
 
NC_008751  Dvul_0168  two component, sigma54 specific, Fis family transcriptional regulator  44.49 
 
 
459 aa  376  1e-103  Desulfovibrio vulgaris DP4  Bacteria  normal  0.564625  normal  0.730975 
 
 
-
 
NC_012560  Avin_29000  sigma54-dependent response regulator, two-component  41.43 
 
 
472 aa  377  1e-103  Azotobacter vinelandii DJ  Bacteria  normal  0.99042  n/a   
 
 
-
 
NC_013440  Hoch_4153  two component, sigma54 specific, transcriptional regulator, Fis family  42.54 
 
 
466 aa  375  1e-103  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.11717 
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  43.16 
 
 
476 aa  378  1e-103  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  43.91 
 
 
462 aa  376  1e-103  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  2.5661e-05  n/a   
 
 
-
 
NC_009675  Anae109_2442  two component, sigma54 specific, Fis family transcriptional regulator  42.92 
 
 
480 aa  376  1e-103  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2521  two component, sigma54 specific, Fis family transcriptional regulator  41.42 
 
 
475 aa  372  1e-102  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0633509 
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  43.52 
 
 
469 aa  374  1e-102  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  43.52 
 
 
469 aa  374  1e-102  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_008554  Sfum_1488  two component, sigma54 specific, Fis family transcriptional regulator  44.57 
 
 
464 aa  372  1e-102  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.781886  normal  0.688737 
 
 
-
 
NC_007760  Adeh_1326  two component, sigma54 specific, Fis family transcriptional regulator  43.02 
 
 
485 aa  373  1e-102  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2629  two component, sigma54 specific, transcriptional regulator, Fis family  43.02 
 
 
483 aa  372  1e-102  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.14604  n/a   
 
 
-
 
NC_007492  Pfl01_2004  two component, sigma-54 specific, Fis family transcriptional regulator  41.88 
 
 
478 aa  373  1e-102  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.753041 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  43.54 
 
 
463 aa  375  1e-102  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_010501  PputW619_2788  two component, sigma54 specific, Fis family transcriptional regulator  41.81 
 
 
474 aa  375  1e-102  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  43.2 
 
 
460 aa  375  1e-102  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1635  two component, sigma54 specific, transcriptional regulator, Fis family  44.74 
 
 
457 aa  373  1e-102  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  43.52 
 
 
467 aa  373  1e-102  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  44.05 
 
 
468 aa  369  1e-101  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_008009  Acid345_2604  two component, sigma54 specific, Fis family transcriptional regulator  43.83 
 
 
459 aa  370  1e-101  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2041  sigma-54 dependent DNA-binding response regulator  44.96 
 
 
455 aa  369  1e-101  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  44.3 
 
 
471 aa  369  1e-101  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2533  two component, sigma54 specific, transcriptional regulator, Fis family  42.79 
 
 
483 aa  371  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  43.64 
 
 
463 aa  369  1e-101  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_008009  Acid345_3356  two component, sigma54 specific, Fis family transcriptional regulator  44.03 
 
 
484 aa  370  1e-101  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1657  two component, sigma54 specific, transcriptional regulator, Fis family  44.2 
 
 
456 aa  371  1e-101  Geobacter lovleyi SZ  Bacteria  normal  0.0365007  n/a   
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  41.78 
 
 
456 aa  368  1e-100  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_011060  Ppha_1319  two component, sigma54 specific, transcriptional regulator, Fis family  43.27 
 
 
452 aa  366  1e-100  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1385  acetoacetate metabolism regulatory protein AtoC  42.23 
 
 
460 aa  367  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2955  two component, sigma54 specific, Fis family transcriptional regulator  45.49 
 
 
460 aa  367  1e-100  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.66681 
 
 
-
 
NC_009483  Gura_1802  two component, sigma-54 specific, Fis family transcriptional regulator  44.05 
 
 
459 aa  366  1e-100  Geobacter uraniireducens Rf4  Bacteria  normal  0.0135454  n/a   
 
 
-
 
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