Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2524 |
Symbol | |
ID | 2685656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2781835 |
End bp | 2783229 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637127214 |
Product | sigma-54 dependent DNA-binding response regulator |
Protein accession | NP_953570 |
Protein GI | 39997619 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGA TTCTCATCAT AGACGACGAG GCGTTCATCC GCGAAAACGT GGAGCGGATC CTCACCGACG ACGGCTATCA GGTTCTCTGC GCCGCCTCCG GCACGGAGGC CCGCGAGATC GTTGCCGACG AGGACGTTGA CCTGGTCCTG CTGGACCTGA ACCTGGGCAC CGAGGACGGC ATCGAGGTCC TCAAGGAGCT GAAACTCCTG GACCCGGAGC TCCTCGTCAT CATCATAACC GGCTTCGGCT CGGTGGAGAG CGCCGTGGAC GCCCTGAAGC TGGGCGCGTT CCACTACATG AAGAAACCCT TCAAGGCGGA CGCCCTGCGG GTCATCGTGA AACTGGCGCT CCAGACCCAG ACCCTGCGGC GCGAGGTCCG CAATCTCCGC AAGGGGGATC TGACCCTGTT CGAAAATGTC CCCCTGGTGG GGGCCGGCGA GGGGCTGAAG GAGATCATCC GCCAGGTCAA GGAGGTGGCC CGCTTTCCCC TCTCCACGGT CCTCATCACC GGCGAGTCGG GCACCGGCAA GGAACTGGTG GCGCGCACCA TTCACCACCT TTCGGACCGG CGCGAGGCCC CCTTCGTCGC CATCAACTGC GCCTCCATGC CGGTTTCGCT GCTGGAAAGC GAACTCTTCG GCCACGAGAA GGGGGCGTTC ACCGATGCCA GCCAGCGCAA GCCGGGCCTT TTTGAAGAAG CCCACAAGGG GACCATCTTT CTGGACGAGA TCGGCGAGAT GGATGTCTCC ATCCAGGCCA AGCTGCTGCG GGTGCTGGAA GACCGGAAGA TCAGGCGGGT CGGCGGAACG CGGAACATCG ACATCGACGT GCGGGTGATC GCCGCCACCA ACCGCAACCT GCGCGACGCC ATCCGCGAAG GGAACTTCAG GGAAGACCTC TACTATCGTC TCAACGTGTT CCCCATCCAC ATCCCGCCGC TGCGGGAGCG GAAAGAGGAT ATCCCGGTCC TGGCGAAATT CTACCTGGAC CGTTACGGCC GCACCTTCAA CCGCAGCTTC CAGATCATCT CGGCCGAGGC CCTGCGGCTG CTGGAAACGC ACCCCTGGCC CGGCAACATC CGCGAGATGA AAAACGTCAT CGAGCGGATC TGCATCATGC ACGACGGCCC GGAACTGACC CCGAACCACC TTCCGCCCGA AATCAAGCAG ACCGAGGGGA GCGTTGCCCC GCCGGCCACG GATGTAAGCG CGGATCTGGC CCAGGGGCTC GAAGCGGCCA CCGACCGCTA CGAAAAGCAG CTCATCGCTG CGGCCCTGGC CATGACCGGC AACAACGTGC TGCAGGCGGC CCAGATTCTC AAGATTCCGC GCGGAACGCT ACGCTACAAG ATGACACGGC ACGGATTGCA CGGGGGGGGG AGCGACGGGG GATAG
|
Protein sequence | MEKILIIDDE AFIRENVERI LTDDGYQVLC AASGTEAREI VADEDVDLVL LDLNLGTEDG IEVLKELKLL DPELLVIIIT GFGSVESAVD ALKLGAFHYM KKPFKADALR VIVKLALQTQ TLRREVRNLR KGDLTLFENV PLVGAGEGLK EIIRQVKEVA RFPLSTVLIT GESGTGKELV ARTIHHLSDR REAPFVAINC ASMPVSLLES ELFGHEKGAF TDASQRKPGL FEEAHKGTIF LDEIGEMDVS IQAKLLRVLE DRKIRRVGGT RNIDIDVRVI AATNRNLRDA IREGNFREDL YYRLNVFPIH IPPLRERKED IPVLAKFYLD RYGRTFNRSF QIISAEALRL LETHPWPGNI REMKNVIERI CIMHDGPELT PNHLPPEIKQ TEGSVAPPAT DVSADLAQGL EAATDRYEKQ LIAAALAMTG NNVLQAAQIL KIPRGTLRYK MTRHGLHGGG SDGG
|
| |