137 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Sterm_0001  CDS  NC_013517  361  1719  1359  chromosomal replication initiator protein DnaA  YP_003306820  decreased coverage  3.30873e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0053  CDS  NC_013517  59290  59616  327  hypothetical protein  YP_003306872  decreased coverage  1.41355e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0054  CDS  NC_013517  59787  60812  1026  hypothetical protein  YP_003306873  decreased coverage  1.67469e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0063  CDS  NC_013517  72153  72617  465  hypothetical protein  YP_003306882  decreased coverage  4.92485e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0140  CDS  NC_013517  149185  149973  789  Cof-like hydrolase  YP_003306956  decreased coverage  3.81708e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0164  CDS  NC_013517  178933  180042  1110  cell division protein FtsZ  YP_003306980  decreased coverage  5.56995e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0165  CDS  NC_013517  180284  180568  285  ribosomal protein S6  YP_003306981  decreased coverage  2.56198e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0196  CDS  NC_013517  209628  210035  408  ATP synthase I  YP_003307012  decreased coverage  1.89576e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0249  CDS  NC_013517  269474  270133  660  TrkA-N domain protein  YP_003307065  decreased coverage  0.00172297  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0282  CDS  NC_013517  305086  306861  1776  Polypeptide-transport-associated domain protein ShlB-type  YP_003307097  decreased coverage  0.00122083  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0313  CDS  NC_013517  340491  341168  678  protein of unknown function DUF1275  YP_003307128  decreased coverage  5.35924e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0320  CDS  NC_013517  359531  361000  1470  5'-Nucleotidase domain protein  YP_003307135  decreased coverage  7.30834e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0368  CDS  NC_013517  421856  422704  849  peptidase M48 Ste24p  YP_003307183  decreased coverage  1.732e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0369  CDS  NC_013517  422913  423689  777  aminoglycoside phosphotransferase  YP_003307184  decreased coverage  1.70406e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0370  CDS  NC_013517  423815  424630  816  peptidase M48 Ste24p  YP_003307185  decreased coverage  6.09738e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0390  CDS  NC_013517  446457  446894  438  Glyoxalase/bleomycin resistance protein/dioxygenase  YP_003307205  decreased coverage  3.74686e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0474  CDS  NC_013517  519047  520903  1857  PTS system, beta-glucoside-specific IIABC subunit  YP_003307282  decreased coverage  0.000629343  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0518  CDS  NC_013517  571914  572423  510  hypothetical protein  YP_003307323  decreased coverage  3.30322e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0548  CDS  NC_013517  595588  596967  1380  MATE efflux family protein  YP_003307352  decreased coverage  8.24418e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0567  CDS  NC_013517  616849  618018  1170  initiator RepB protein  YP_003307371  decreased coverage  5.93958e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0582  CDS  NC_013517  635135  637129  1995  TonB-dependent receptor plug  YP_003307386  decreased coverage  0.000848459  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0621  CDS  NC_013517  672528  673721  1194  acetate kinase  YP_003307425  decreased coverage  2.98382e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0707  CDS  NC_013517  760088  762724  2637  magnesium-translocating P-type ATPase  YP_003307510  decreased coverage  0.00140907  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0720  CDS  NC_013517  776401  777270  870  protein of unknown function DUF6 transmembrane  YP_003307523  decreased coverage  0.000349572  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0730  CDS  NC_013517  797818  798420  603  transcriptional regulator, TetR family  YP_003307533  decreased coverage  1.93069e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0751  CDS  NC_013517  827670  828575  906  inner-membrane translocator  YP_003307554  decreased coverage  0.000454798  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0752  CDS  NC_013517  828669  829412  744  transcriptional regulator, GntR family  YP_003307555  decreased coverage  0.00012009  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0773  CDS  NC_013517  855726  857813  2088  ribonuclease R  YP_003307576  decreased coverage  8.96455e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0774  CDS  NC_013517  857838  858419  582  hypothetical protein  YP_003307577  decreased coverage  4.45621e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0952  CDS  NC_013517  997462  999804  2343  hypothetical protein  YP_003307751  decreased coverage  1.66873e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_0977  CDS  NC_013517  1039918  1041117  1200  Mandelate racemase/muconate lactonizing protein  YP_003307776  decreased coverage  9.13378e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1031  CDS  NC_013517  1115745  1117406  1662  Glycerol dehydratase  YP_003307830  decreased coverage  0.00671582  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1068  CDS  NC_013517  1167257  1167940  684  Transaldolase  YP_003307867  decreased coverage  7.67665e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1100  CDS  NC_013517  1203452  1204546  1095  Radical SAM domain protein  YP_003307899  decreased coverage  0.00787041  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1137  CDS  NC_013517  1241598  1243391  1794  aspartyl-tRNA synthetase  YP_003307936  decreased coverage  0.000518109  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1138  CDS  NC_013517  1243723  1245075  1353  MATE efflux family protein  YP_003307937  decreased coverage  0.000318212  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1179  CDS  NC_013517  1283978  1284442  465  acetyl-CoA carboxylase, biotin carboxyl carrier protein  YP_003307978  decreased coverage  1.77179e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1180  CDS  NC_013517  1284566  1285291  726  hypothetical protein  YP_003307979  decreased coverage  2.88066e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1355  CDS  NC_013517  1439826  1440737  912  transcriptional regulator, AraC family  YP_003308151  decreased coverage  1.18066e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1356  CDS  NC_013517  1440813  1441394  582  protein of unknown function UPF0157  YP_003308152  decreased coverage  2.76888e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1357  CDS  NC_013517  1441553  1442608  1056  hypothetical protein  YP_003308153  decreased coverage  2.87593e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1358  CDS  NC_013517  1443026  1443523  498  hypothetical protein  YP_003308154  decreased coverage  4.06208e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1359  CDS  NC_013517  1444193  1444345  153  hypothetical protein  YP_003308155  decreased coverage  9.84976e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1360  CDS  NC_013517  1444430  1445059  630  hypothetical protein  YP_003308156  decreased coverage  5.77542e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1361  CDS  NC_013517  1445301  1445966  666  MORN variant repeat protein  YP_003308157  decreased coverage  6.16992e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1379  CDS  NC_013517  1468848  1469183  336  export-related chaperone CsaA  YP_003308174  decreased coverage  1.59507e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1380  CDS  NC_013517  1469220  1469747  528  hypothetical protein  YP_003308175  decreased coverage  2.69855e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1381  CDS  NC_013517  1469839  1472412  2574  ATP-dependent chaperone ClpB  YP_003308176  decreased coverage  3.10398e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1454  CDS  NC_013517  1521387  1522907  1521  Phosphoglucosamine mutase  YP_003308247  decreased coverage  1.53851e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1518  CDS  NC_013517  1606433  1609024  2592  iron-containing alcohol dehydrogenase  YP_003308308  decreased coverage  4.99783e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1521  CDS  NC_013517  1615216  1616244  1029  transcriptional regulator, LacI family  YP_003308311  decreased coverage  0.000124724  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1522  CDS  NC_013517  1616445  1617539  1095  ABC transporter related protein  YP_003308312  decreased coverage  6.22253e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1550  CDS  NC_013517  1650681  1651316  636  channel protein, hemolysin III family  YP_003308340  decreased coverage  5.61476e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1604  CDS  NC_013517  1709846  1710424  579  crossover junction endodeoxyribonuclease RuvC  YP_003308394  decreased coverage  8.14107e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1820  CDS  NC_013517  1953739  1955979  2241  DNA topoisomerase I  YP_003308609  decreased coverage  8.28965e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1895  CDS  NC_013517  2020973  2021482  510  hypothetical protein  YP_003308683  decreased coverage  3.69983e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1896  CDS  NC_013517  2021645  2022124  480  hypothetical protein  YP_003308684  decreased coverage  3.69983e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1909  CDS  NC_013517  2033242  2034030  789  hypothetical protein  YP_003308697  decreased coverage  1.0644e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1933  CDS  NC_013517  2054535  2055053  519  putative PTS IIA-like nitrogen-regulatory protein PtsN  YP_003308720  decreased coverage  1.95157e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1934  CDS  NC_013517  2055071  2056129  1059  PTS system, fructose subfamily, IIC subunit  YP_003308721  decreased coverage  1.54962e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1969  CDS  NC_013517  2099923  2100729  807  histidinol phosphate phosphatase HisJ family  YP_003308755  decreased coverage  0.000659407  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1996  CDS  NC_013517  2126200  2127432  1233  Alcohol dehydrogenase zinc-binding domain protein  YP_003308782  decreased coverage  3.1491e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_1997  CDS  NC_013517  2127512  2128000  489  hypothetical protein  YP_003308783  decreased coverage  2.82274e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2021  CDS  NC_013517  2153256  2153699  444  GCN5-related N-acetyltransferase  YP_003308807  decreased coverage  0.000198692  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2023  CDS  NC_013517  2154762  2156708  1947  fructose-16-bisphosphatase  YP_003308809  decreased coverage  9.88685e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2033  CDS  NC_013517  2165619  2166596  978  fructose-1,6-bisphosphate aldolase, class II  YP_003308819  decreased coverage  8.57052e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2060  CDS  NC_013517  2188774  2189154  381  hypothetical protein  YP_003308846  decreased coverage  9.54753e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2089  CDS  NC_013517  2215090  2215395  306  hypothetical protein  YP_003308874  decreased coverage  9.71418e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2114  CDS  NC_013517  2244743  2245474  732  hypothetical protein  YP_003308899  decreased coverage  9.47593e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2136  CDS  NC_013517  2274711  2275565  855  transcriptional regulator, RpiR family  YP_003308921  decreased coverage  1.08566e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2152  CDS  NC_013517  2291830  2292663  834  Glyoxalase/bleomycin resistance protein/dioxygenase  YP_003308937  decreased coverage  0.00497533  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2165  CDS  NC_013517  2303725  2305158  1434  acyl-CoA dehydrogenase domain protein  YP_003308950  decreased coverage  0.00017595  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2197  CDS  NC_013517  2335360  2336088  729  Cobyrinic acid ac-diamide synthase  YP_003308982  decreased coverage  7.39548e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2198  CDS  NC_013517  2336090  2336758  669  hypothetical protein  YP_003308983  decreased coverage  5.75364e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2246  CDS  NC_013517  2373647  2374732  1086  MORN variant repeat protein  YP_003309031  decreased coverage  8.29115e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2247  CDS  NC_013517  2374899  2375801  903  hypothetical protein  YP_003309032  decreased coverage  5.30465e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2248  CDS  NC_013517  2375910  2376287  378  hypothetical protein  YP_003309033  decreased coverage  5.26184e-10  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2249  CDS  NC_013517  2376451  2377323  873  hypothetical protein  YP_003309034  decreased coverage  2.63737e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2250  CDS  NC_013517  2377320  2378084  765  UBA/THIF-type NAD/FAD binding protein  YP_003309035  decreased coverage  2.51146e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2262  CDS  NC_013517  2386937  2388232  1296  Xanthine/uracil/vitamin C permease  YP_003309047  decreased coverage  3.90062e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2297  CDS  NC_013517  2430372  2430641  270  hypothetical protein  YP_003309082  decreased coverage  1.21455e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2317  CDS  NC_013517  2453991  2454530  540  protein of unknown function DUF448  YP_003309102  decreased coverage  0.000982991  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2354  CDS  NC_013517  2500433  2501269  837  UDP-3-0-acyl N-acetylglucosamine deacetylase  YP_003309138  decreased coverage  0.000823328  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2480  CDS  NC_013517  2660853  2661461  609  putative transcriptional regulator, TetR family  YP_003309264  decreased coverage  5.30465e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2598  CDS  NC_013517  2751531  2752391  861  HNH endonuclease  YP_003309377  decreased coverage  0.000498075  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2599  CDS  NC_013517  2752378  2754237  1860  hypothetical protein  YP_003309378  decreased coverage  0.00474195  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2607  CDS  NC_013517  2759274  2759504  231  hypothetical protein  YP_003309384  decreased coverage  0.00391895  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2620  CDS  NC_013517  2778088  2778666  579  hypothetical protein  YP_003309396  decreased coverage  2.46316e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2794  CDS  NC_013517  2982155  2982598  444  hypothetical protein  YP_003309569  decreased coverage  8.83203e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2795  CDS  NC_013517  2982673  2983077  405  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  YP_003309570  decreased coverage  1.16444e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2796  CDS  NC_013517  2983267  2983647  381  hypothetical protein  YP_003309571  decreased coverage  7.84214e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2810  CDS  NC_013517  2997436  2999190  1755  ABC transporter related protein  YP_003309585  decreased coverage  2.7505e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2811  CDS  NC_013517  2999616  3001106  1491  4-alpha-glucanotransferase  YP_003309586  decreased coverage  5.26525e-07  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2910  CDS  NC_013517  3058525  3058947  423  hypothetical protein  YP_003309685  decreased coverage  1.70195e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2943  CDS  NC_013517  3083339  3084502  1164  RNA polymerase, sigma 70 subunit, RpoD subfamily  YP_003309717  decreased coverage  0.0053335  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2957  CDS  NC_013517  3098641  3099603  963  Glyoxylate reductase  YP_003309731  decreased coverage  8.53458e-09  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_2958  CDS  NC_013517  3099800  3101209  1410  PTS system, glucose-like IIB subunint  YP_003309732  decreased coverage  5.85051e-08  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_3013  CDS  NC_013517  3154198  3154395  198  cold-shock DNA-binding domain protein  YP_003309786  decreased coverage  2.13425e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_3035  CDS  NC_013517  3175483  3176022  540  YbaK/prolyl-tRNA synthetase associated region  YP_003309808  decreased coverage  1.18066e-06  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
Sterm_3115  CDS  NC_013517  3263389  3264561  1173  hypothetical protein  YP_003309888  decreased coverage  1.22918e-05  n/a    Sebaldella termitidis ATCC 33386  Bacteria 
 
 
-
 
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