Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0752 |
Symbol | |
ID | 8596235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 828669 |
End bp | 829412 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003307555 |
Protein GI | 269119378 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00012009 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG AAAATAAGGA TTTAGAAAAA GTAAAAAATA AGATTCCTTT GTATGTAACT GTTTATGAAG AGATATTCAG TATGATAAAC AGAGGGGAGT TTAAGCTGGG AGAAAAGCTT CCCGGTGAGA ATGAGCTTGC CAAAATGCTG AATGTAAGCA GGGGGACATT AAGACAGGCT CTGCTGCTGC TGCAGGAAGA TAATATTATT TTTAATTATC AGGGAAAAGG AAATTTTATT ACAAATAATA AATTTAAAAT AAATGAGACT GCACAAAAGG AAGTAATAAT AGCTACTGCA TGTAATATTC AGGAATACAG TGATATAGAA GCAGAGGTTG TTTTTCAGCT GCCTACTGTA AAGCTTCAAA GAGCTTTGAA TATAGAAAAC AGCAGAATGA TAGCAGCTTT TGACATTGAT TTTTATATAA AAGGGGAACG TGTATGCTAT ATGGTGGCAT TTCTGCCTTA TGACAATATA AGCGAGTATA ATATTGATTT TAAGGATAAA AAGAGTATAG CAGCTTCTCT TTTTGATTAT GTGGAAAAAA ATGTAGTAGA TATAAGAACA AAGCTTACAA TAATAGAAGT AGAAAAGGAA CACAGGAAAA AATTCGATCC TGAGCATACA AAATCGCTGG CAGTATTTGA CGAGATAGTA TACTCTGATC TTGGAATGCC TATTGTCACT ATGAAAACAT ACTGTGTTCC GAAATATTAT GAATTTTACA TAAAAAGAAA GTGA
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Protein sequence | MAKENKDLEK VKNKIPLYVT VYEEIFSMIN RGEFKLGEKL PGENELAKML NVSRGTLRQA LLLLQEDNII FNYQGKGNFI TNNKFKINET AQKEVIIATA CNIQEYSDIE AEVVFQLPTV KLQRALNIEN SRMIAAFDID FYIKGERVCY MVAFLPYDNI SEYNIDFKDK KSIAASLFDY VEKNVVDIRT KLTIIEVEKE HRKKFDPEHT KSLAVFDEIV YSDLGMPIVT MKTYCVPKYY EFYIKRK
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