Gene Sterm_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2480 
Symbol 
ID8597944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp2660853 
End bp2661461 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content22% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003309264 
Protein GI269121087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000530465 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG ATGAATTGTA CAAAGATCTT GAACAATATT TTTTAGAAAA AGGTATCAGT 
GAAGGCAGCT TTAAGGAATT TTCCGAACAA AGAAAAATAT CACGTACAAG TTTAAATTAT 
TATTTCAAAA ATAAAGACTA TATCTATACA AAAATTCTCA GTAAAATTTT AAAAGATTTT 
GAAAAAAAAT TTTTTGCGAT TATAAATAAT GAAAAGTTGT CTTATTATGA AAGAATCGAT 
GTCATATTGG ATATGTATTT TAATATAACA AAAAAGAATA TAAAATTATA TCCGTATATA 
CAGCATTTAA ATGAGATAGA AAAAAAAGTA AAAAATAAAA AAGATGTAAA TACTGATGAG 
GTAATTGAGA TTATTAAGAA AATATGCGAT AATTTTATTG ATATTACAAA TAAAGAAATT 
CAAAATGGGA GCATCAATAT AAACTATCCG AAAAATTATT TGTTTCTGAT CATTTCCACA 
TGCTTATTTC CTTTTACGAC GCCTTATATA ATAGAGTCTG TCATAAATAT GAGTATGGAA 
GAATTTTATG AAAAGCATTA CGAGTATATG AAATACATTT TATTGAAAGA AATAGAGATA 
TTAAAATAA
 
Protein sequence
MNKDELYKDL EQYFLEKGIS EGSFKEFSEQ RKISRTSLNY YFKNKDYIYT KILSKILKDF 
EKKFFAIINN EKLSYYERID VILDMYFNIT KKNIKLYPYI QHLNEIEKKV KNKKDVNTDE 
VIEIIKKICD NFIDITNKEI QNGSININYP KNYLFLIIST CLFPFTTPYI IESVINMSME 
EFYEKHYEYM KYILLKEIEI LK