| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0567 |
|---|
| Symbol | |
|---|
| ID | 8596051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 616849 |
|---|
| End bp | 618018 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | initiator RepB protein |
|---|
| Protein accession | YP_003307371 |
|---|
| Protein GI | 269119194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000593958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATA TATTTAATTT TACCCCAACA AAAAAATCGA AAAATTTTAT TGTAAACATA
AAGCTAAATA AGAATTTTTC CAAAAGCGAG AAGGAATTTT TCGAGCTTCT GATTTTTAAT
TTTGATCTTG CTTCACCATA TATAAGTCTT GACTCTAAAG ATCTGATAAA GGTGCTGAAT
CTGGATACTG ATTCAAAACT GCAGGACTTT CTTCACAAAA TTACCGACAA AAAGGTTCTT
TACTCTATTA CGGAAGAAGA CGCTGTGATA TACAGCGGAG CCTTTTCACC TGTATCTTCC
TATTTTCAAA AGAAAGAAAA AATATATATT TTTACTGCCG AAGAGCTGAA ATTGTTTCTT
ACAGAAGAAA ATATTTTTTC CCACTTTAAT TTTAAAAAAT TTATTTTTAT GGAAAAAAAC
CTTTCTCTTA TTTTATATAA TCATTTAAAT AATATTCTTC CGGCAAACAC ACTTTCTGTC
ACTGTTACAG AGCTTAAGGA ATTATTCGGA CTGGAAGATT CCTATAACAG AATTTATGAT
TTTGAAAAGT ATATTTTGAA AAAAATAGTG AAAAATATAA ATAAATATAC CGATCTTGAG
GTAAAATATG AAAAACCGGC ACATTCCGGC TCAGTAATTA ATTTTACTTT TAAAAGTACA
TATCGTGAAA ATATTTTTGA AAAGACAAAG GAAATTATAG ATACTGTAAA ATCAAAAATT
ATTAACTATG AAAATGTTTA TAATCTTATA CTTAATTATC TGGAAAAAAG AGGGCTCAGC
TATGTTAATA ATAATGTCTC CTACATTAAC AGCCTGAAAA ATATCCAGAA TTTTGATGCA
CATCTGAGAA AGGCACTGCT TTATGATCTT TATTCCTCTA ATTTAAAAAA TATAAAGCCG
GAAAGCAAAT TTATCAGTTT TTTTGAAAAA TATCATGTTT ATAAAAATTC CGTAACACTC
CAGAATGATC TGTATAAATA TATCAACAGC ATTCTGTATA TTACATCTTC GCTGGAAGAG
CTCTATTCCT TTGAAGTAAT CAATGAAATT AAAAACCTTG AGGACGGTTC TTTTTTTACT
TATAAAAATG AAGATTTTGA AATATTTGTA GAATTTTTAC AGAATAAAAG CAGCTCTATA
CAGATTTTTA TCAGAGAGGA CCTTATCTGA
|
|---|
| Protein sequence | MIDIFNFTPT KKSKNFIVNI KLNKNFSKSE KEFFELLIFN FDLASPYISL DSKDLIKVLN
LDTDSKLQDF LHKITDKKVL YSITEEDAVI YSGAFSPVSS YFQKKEKIYI FTAEELKLFL
TEENIFSHFN FKKFIFMEKN LSLILYNHLN NILPANTLSV TVTELKELFG LEDSYNRIYD
FEKYILKKIV KNINKYTDLE VKYEKPAHSG SVINFTFKST YRENIFEKTK EIIDTVKSKI
INYENVYNLI LNYLEKRGLS YVNNNVSYIN SLKNIQNFDA HLRKALLYDL YSSNLKNIKP
ESKFISFFEK YHVYKNSVTL QNDLYKYINS ILYITSSLEE LYSFEVINEI KNLEDGSFFT
YKNEDFEIFV EFLQNKSSSI QIFIREDLI
|
|---|
| |