Gene Sterm_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1180 
Symbol 
ID8596659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp1284566 
End bp1285291 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content33% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003307979 
Protein GI269119802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000288066 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA AAAAAAGCTA TTATATAACA GCGGCAATAT TTGTTCTGAT ATCGGGATTT 
TTTTCGCAGT ATATAAAATA TGAGGTGGAA AGTTTCAGAT TTTTAAAAAT TTTTATGAAT 
AAATATGCTG ATACTGTGAT TTATCTGGAA CAAAAGAATT CTACAGACAG CTTTTTCACC 
AAAAAAAGTA AAGCTGTAAA AATGAGAAAA GAACTCGGAG AGAAAATAAG CAGAATAAAT 
AAATATGCAG GATCGGAAGC CGGAAATGAA CCGGAATTTC TTTCAGAAAT GTATAACAAA 
ACAGTAGGGA TGACTGTACA GCAGGCTTTG TCCGAAGAGG CAGTAAGAAA TAAAATGCTT 
AATGACAAGC TTATCAGTGA TGTTTATAAT AATAAAGCCG TACTGAAAAG AAACGCAGGT 
TTTATTTCAG GAATAAAAAA CGGATTTTTA ACAGGTGTCA GTTATCCTGT TTCCGTAAAA 
GATAAATTCA TAAGCCTGAC TGACAGAGGA GAGTCTCTTC CGGTTTCAAT CATTAAAGCA 
TATTTTGTTA GTATGGCTGA TTATCTGAAA ATTGGAATGA ATTGTTTTTT ATTCTATGGT 
CTGCCCTACA AAGCAGGGTA TGCAGTCACT TGGCTTATCA GTGCTTTTTT AACTGTTATT 
CTGGTATTTC TTCCGTTTTT TCTGTTAAAA CCGAAAAAAA GACCAAAAAC AACATATGAA 
TTTTAA
 
Protein sequence
MAKKKSYYIT AAIFVLISGF FSQYIKYEVE SFRFLKIFMN KYADTVIYLE QKNSTDSFFT 
KKSKAVKMRK ELGEKISRIN KYAGSEAGNE PEFLSEMYNK TVGMTVQQAL SEEAVRNKML 
NDKLISDVYN NKAVLKRNAG FISGIKNGFL TGVSYPVSVK DKFISLTDRG ESLPVSIIKA 
YFVSMADYLK IGMNCFLFYG LPYKAGYAVT WLISAFLTVI LVFLPFFLLK PKKRPKTTYE 
F