Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0730 |
Symbol | |
ID | 8596213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 797818 |
End bp | 798420 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003307533 |
Protein GI | 269119356 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000193069 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGAAA CGAAAGAAAA AATTTTATTA GGGATGTTAG ACTTAGTTGC TGAAACTGGT CTTGAAAAAG CTTCTATCGG AAGACTGTGC AAGAAAATAA AAGTCAGTCC TGGAAATGTA TATTTTTACT TTTCCAGCAA AGTAGAATTA TTGAATACAC TATACTATTA CTGCATTAAC AGTTTAATAG AAGCAGTCGA TATAAAAACT TACACGGAAA TTTCCAAAGA TGAGGAGTGT ACAGTGTACA CCACTCTTAT GGAGGATCTT GTAAAAAAAG TTATTTATTT TTATAAATCA AATCCTTGTA TGCTGAACTT TATCATAACT TCAAAAAGTT CATGCTATCT TTCAGATGAG ATAAAAAGAG GGCGGTTCAC AGGAGCAAAT TTTTTTAACT CATTCTGGGA AAAATGCAAG GATAAAGGGA TTATCAAAAA TGTAAGTACA GAATTCATAA TCGCCTTTAT TCTGGGAGTC ATTTATGAAT TTATGAAGGA AGACATTATC CACAAGAATA TTTCGCTGGA TGATGAAAAA ATTGACATAC TGAATGATCT TATCTGGTCA GGATTATACG TAGAAAACAG GGTTATGTCT TAG
|
Protein sequence | MIETKEKILL GMLDLVAETG LEKASIGRLC KKIKVSPGNV YFYFSSKVEL LNTLYYYCIN SLIEAVDIKT YTEISKDEEC TVYTTLMEDL VKKVIYFYKS NPCMLNFIIT SKSSCYLSDE IKRGRFTGAN FFNSFWEKCK DKGIIKNVST EFIIAFILGV IYEFMKEDII HKNISLDDEK IDILNDLIWS GLYVENRVMS
|
| |