Gene Sterm_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1933 
Symbol 
ID8597400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2054535 
End bp2055053 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content37% 
IMG OID 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_003308720 
Protein GI269120543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000195157 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACAC TTATTAATGA AAAACTGATA AAACTGGATA TGGAGGTGAC AACAAAAGAA 
GAAGCCATAG AAAATCTGGC AAAATTAATA CACGAAGAAA AAAAACTGAA TTGTGTATGG
AAAGAAAACA GCCTTGATAA ATGCCAAAAT TGTGATTTCT GCTCTAAGAC AGGATTTTTG
CATGCTCTAC ATGAGAGAGA AAAATCGTTT CCTACAGCAG TAGGCTATTC TTTTGCCATT
CCACACGGGA AATGCGGTTC TGTAAAGGAT GCTGCCATAG CATTCGCAAG ACTGAAAGAT
GAGGTAAAGT GGGGAGAAGA CGGTGATGAG GACGAGTATG TGAAATATGT ATTTATGATT
GGTGTATCAG AAGAGGCTGC GGGAGATGAA CACATGAGAA TACTTATAAA ATTATCTACT
TCTATACTGG ATGACGATTT TAGAGACAGG CTGTCAAGCA TAAATACAAA AGAAGAGGCT
TTGCAGATAA TAAAGGAGTA CTCTGACAAT ATAAACTAA
 
Protein sequence
MGTLINEKLI KLDMEVTTKE EAIENLAKLI HEEKKLNCVW KENSLDKCQN CDFCSKTGFL 
HALHEREKSF PTAVGYSFAI PHGKCGSVKD AAIAFARLKD EVKWGEDGDE DEYVKYVFMI
GVSEEAAGDE HMRILIKLST SILDDDFRDR LSSINTKEEA LQIIKEYSDN IN