Gene Sterm_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0313 
Symbol 
ID8595808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp340491 
End bp341168 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content35% 
IMG OID 
Productprotein of unknown function DUF1275 
Protein accessionYP_003307128 
Protein GI269118951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000535924 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAA AAAAATTCAA AAAATACAAA CAGACCTCGG ATACTTTTCG AATAGGAATA 
TTATTAAGTA TGGCAGGGGG ATTTACAGAT GCCTATACTT TTGTTATAAG AGGAAATGTA 
TTCGCAAATG CGCAGACAGG GAATATAGTT CTTTTAGGAC TTAAACTCGT AGAAGCAAAA 
TGGGGAGAAG CTGTTTTTTA TCTTTTTCCG GTTTCGGCTT TTGTTCTGGG AATTTTAGCC 
GCCGAATTTA TCAGGGCAAA ACTTAAAGAC AAGAAAAGAA TACACTGGAG ACAGATTGTC 
ATTCTTATAG AAATTCTCGT ATTGTTTTTC TCGGTCTTTG TACCTCAGGG AAACTATAAT 
GTTGTTGTAA ATATAGCAAT TTCATTTATA TGTTCGCTTC AGGTTCAGAG CTTCCGGAAA 
GTAAACGGTA ATTTGTCTGC AACCACAATG TGTACAGGCA ATTTGAGAAG CGGAACAGAG 
CAGCTGTATA AATATATAGT GCAGAAAGAC AGTGAGGCAA AAGAAAAATA TATGATTTAT 
TACGGATTAA TACTGTTTTT TATAATCGGA GCAGTAATCG GAGCTCTTTT TACGGAAATA 
CTGCGTGAAA AAGCATTATT TGTATGCTGC GGTATTTTAA TAACAGTATT TGCTGTGATG 
TTTAGAGATG AAATGTAA
 
Protein sequence
MFEKKFKKYK QTSDTFRIGI LLSMAGGFTD AYTFVIRGNV FANAQTGNIV LLGLKLVEAK 
WGEAVFYLFP VSAFVLGILA AEFIRAKLKD KKRIHWRQIV ILIEILVLFF SVFVPQGNYN 
VVVNIAISFI CSLQVQSFRK VNGNLSATTM CTGNLRSGTE QLYKYIVQKD SEAKEKYMIY 
YGLILFFIIG AVIGALFTEI LREKALFVCC GILITVFAVM FRDEM